Gene : Glyma.17G125100 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  1251
Name:  ? Glyma.17G125100 Secondary Identifier:  ? PAC:30482273
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PYRIDNUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G125100 0.5kb upstream 0.5kb upstream 4661   true Chr17: 9970351-9975011 Glycine max
Glyma.17G125100 0.5kb upstream 0.5kb upstream 500   false Chr17: 9974512-9975011 Glycine max
Glyma.17G125100 0.5kb downstream 0.5kb downstream 4661   true Chr17: 9969851-9974511 Glycine max
Glyma.17G125100 0.5kb downstream 0.5kb downstream 500   false Chr17: 9969851-9970350 Glycine max
Glyma.17G125100 1.0kb upstream 1.0kb upstream 5161   true Chr17: 9970351-9975511 Glycine max
Glyma.17G125100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9974512-9975511 Glycine max
Glyma.17G125100 1.0kb downstream 1.0kb downstream 5161   true Chr17: 9969351-9974511 Glycine max
Glyma.17G125100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9969351-9970350 Glycine max
Glyma.17G125100 2.0kb upstream 2.0kb upstream 6161   true Chr17: 9970351-9976511 Glycine max
Glyma.17G125100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9974512-9976511 Glycine max
Glyma.17G125100 2.0kb downstream 2.0kb downstream 6161   true Chr17: 9968351-9974511 Glycine max
Glyma.17G125100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9968351-9970350 Glycine max
Glyma.17G125100 5.0kb upstream 5.0kb upstream 9161   true Chr17: 9970351-9979511 Glycine max
Glyma.17G125100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9974512-9979511 Glycine max
Glyma.17G125100 5.0kb downstream 5.0kb downstream 9161   true Chr17: 9965351-9974511 Glycine max
Glyma.17G125100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9965351-9970350 Glycine max
Glyma.17G125100 10.0kb upstream 10.0kb upstream 14161   true Chr17: 9970351-9984511 Glycine max
Glyma.17G125100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9974512-9984511 Glycine max
Glyma.17G125100 10.0kb downstream 10.0kb downstream 14161   true Chr17: 9960351-9974511 Glycine max
Glyma.17G125100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9960351-9970350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243402 5265 Fabidae Singleton cluster - no MSA
124039411 5270 Rosid View MSA
123753415 5271 Pentapetalae View MSA
122792816 5272 Eudicot View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0439889 0.0 0.183586 Low  
cufflinks 0.0215742 0.0 0.0961833 Low  
cufflinks 0.0872258 0.0 0.344177 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0753771 0.0 0.578076 Low  
cufflinks 0.0419587 0.0 0.173686 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.951482 0.0 6.23204   High
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.048     Low High
cufflinks 0.01     Low  
cufflinks 0.001     Low Low
cufflinks 0.021     Low  
cufflinks 0.015     Low  
cufflinks 0.016     Low  
cufflinks 0.179       High
cufflinks 0.008     Low  
cufflinks 0.01     Low  
cufflinks 0.007     Low  
cufflinks 0.018     Low  
cufflinks 0.021     Low  
cufflinks 0.013     Low  
cufflinks 0.014     Low  
cufflinks 0.004     Low  

0 Strain