Gene : Glyma.17G118600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR19877 - WD40 REPEAT PROTEIN Genomic Order:  1186
Name:  ? Glyma.17G118600 Secondary Identifier:  ? PAC:30482367
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G118600 0.5kb upstream 0.5kb upstream 5275   true Chr17: 9383637-9388911 Glycine max
Glyma.17G118600 0.5kb upstream 0.5kb upstream 500   false Chr17: 9383637-9384136 Glycine max
Glyma.17G118600 0.5kb downstream 0.5kb downstream 5275   true Chr17: 9384137-9389411 Glycine max
Glyma.17G118600 0.5kb downstream 0.5kb downstream 500   false Chr17: 9388912-9389411 Glycine max
Glyma.17G118600 1.0kb upstream 1.0kb upstream 5775   true Chr17: 9383137-9388911 Glycine max
Glyma.17G118600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 9383137-9384136 Glycine max
Glyma.17G118600 1.0kb downstream 1.0kb downstream 5775   true Chr17: 9384137-9389911 Glycine max
Glyma.17G118600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 9388912-9389911 Glycine max
Glyma.17G118600 2.0kb upstream 2.0kb upstream 6775   true Chr17: 9382137-9388911 Glycine max
Glyma.17G118600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 9382137-9384136 Glycine max
Glyma.17G118600 2.0kb downstream 2.0kb downstream 6775   true Chr17: 9384137-9390911 Glycine max
Glyma.17G118600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 9388912-9390911 Glycine max
Glyma.17G118600 5.0kb upstream 5.0kb upstream 9775   true Chr17: 9379137-9388911 Glycine max
Glyma.17G118600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 9379137-9384136 Glycine max
Glyma.17G118600 5.0kb downstream 5.0kb downstream 9775   true Chr17: 9384137-9393911 Glycine max
Glyma.17G118600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 9388912-9393911 Glycine max
Glyma.17G118600 10.0kb upstream 10.0kb upstream 14775   true Chr17: 9374137-9388911 Glycine max
Glyma.17G118600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 9374137-9384136 Glycine max
Glyma.17G118600 10.0kb downstream 10.0kb downstream 14775   true Chr17: 9384137-9398911 Glycine max
Glyma.17G118600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 9388912-9398911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307997 5265 Fabidae View MSA
124065489 5270 Rosid View MSA
123747491 5271 Pentapetalae View MSA
122789179 5272 Eudicot View MSA
122051030 5273 Angiosperm View MSA
121344800 5274 Embryophyte View MSA
123428102 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.8591 0.0 140.132 High  
cufflinks 29.0639 0.0 114.643 High  
cufflinks 24.3994 0.0 94.3395 High Low
cufflinks 34.4079 0.0 143.856 High  
cufflinks 34.0116 0.0 137.195 High  
cufflinks 25.3762 0.0 88.2855 High Low
cufflinks 41.1002 0.0 171.628 High High
cufflinks 29.0084 0.0 114.227 High  
cufflinks 28.4416 0.0 111.226 High  
cufflinks 4.911        
cufflinks 4.037        
cufflinks 3.954        
cufflinks 5.061        
cufflinks 6.587       High
cufflinks 2.782       Low
cufflinks 4.335        
cufflinks 2.873       Low
cufflinks 5.933       High
cufflinks 5.265        
cufflinks 5.302        
cufflinks 3.975        
cufflinks 4.832        
cufflinks 4.741        
cufflinks 4.146        
cufflinks 4.505        
cufflinks 3.067       Low

0 Strain