Gene : Glyma.17G166900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10024:SF172 - C2 AND PLANT PHOSPHORIBOSYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Genomic Order:  1669
Name:  ? Glyma.17G166900 Secondary Identifier:  ? PAC:30480465
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G166900 0.5kb upstream 0.5kb upstream 5075   true Chr17: 15253736-15258810 Glycine max
Glyma.17G166900 0.5kb upstream 0.5kb upstream 500   false Chr17: 15253736-15254235 Glycine max
Glyma.17G166900 0.5kb downstream 0.5kb downstream 5075   true Chr17: 15254236-15259310 Glycine max
Glyma.17G166900 0.5kb downstream 0.5kb downstream 500   false Chr17: 15258811-15259310 Glycine max
Glyma.17G166900 1.0kb upstream 1.0kb upstream 5575   true Chr17: 15253236-15258810 Glycine max
Glyma.17G166900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 15253236-15254235 Glycine max
Glyma.17G166900 1.0kb downstream 1.0kb downstream 5575   true Chr17: 15254236-15259810 Glycine max
Glyma.17G166900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 15258811-15259810 Glycine max
Glyma.17G166900 2.0kb upstream 2.0kb upstream 6575   true Chr17: 15252236-15258810 Glycine max
Glyma.17G166900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 15252236-15254235 Glycine max
Glyma.17G166900 2.0kb downstream 2.0kb downstream 6575   true Chr17: 15254236-15260810 Glycine max
Glyma.17G166900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 15258811-15260810 Glycine max
Glyma.17G166900 5.0kb upstream 5.0kb upstream 9575   true Chr17: 15249236-15258810 Glycine max
Glyma.17G166900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 15249236-15254235 Glycine max
Glyma.17G166900 5.0kb downstream 5.0kb downstream 9575   true Chr17: 15254236-15263810 Glycine max
Glyma.17G166900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 15258811-15263810 Glycine max
Glyma.17G166900 10.0kb upstream 10.0kb upstream 14575   true Chr17: 15244236-15258810 Glycine max
Glyma.17G166900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 15244236-15254235 Glycine max
Glyma.17G166900 10.0kb downstream 10.0kb downstream 14575   true Chr17: 15254236-15268810 Glycine max
Glyma.17G166900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 15258811-15268810 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299390 5265 Fabidae View MSA
124063540 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0430486 0.0 0.168589 Low Low
cufflinks 4.66147 0.0 12.4744   High
cufflinks 0.239659 0.0 0.868241    
cufflinks 1.25995 0.0 3.77674    
cufflinks 2.81239 0.0 7.68169    
cufflinks 1.08726 0.0 3.31609    
cufflinks 3.33638 0.0 9.03701    
cufflinks 1.0758 0.0 3.29773    
cufflinks 1.63073 0.0 4.71519    
cufflinks 1.754        
cufflinks 0.185       Low
cufflinks 1.262        
cufflinks 4.198       High
cufflinks 6.832     High High
cufflinks 0.065       Low
cufflinks 2.416        
cufflinks 0.996        
cufflinks 0.695        
cufflinks 5.523       High
cufflinks 1.566        
cufflinks 0.233       Low
cufflinks 1.927        
cufflinks 2.499        
cufflinks 0.081       Low
cufflinks 1.556        
cufflinks 0.472        

0 Strain