Gene : Glyma.17G167900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED Genomic Order:  1679
Name:  ? Glyma.17G167900 Secondary Identifier:  ? PAC:30480124
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G167900 0.5kb upstream 0.5kb upstream 12933   true Chr17: 15517350-15530282 Glycine max
Glyma.17G167900 0.5kb upstream 0.5kb upstream 500   false Chr17: 15517350-15517849 Glycine max
Glyma.17G167900 0.5kb downstream 0.5kb downstream 12933   true Chr17: 15517850-15530782 Glycine max
Glyma.17G167900 0.5kb downstream 0.5kb downstream 500   false Chr17: 15530283-15530782 Glycine max
Glyma.17G167900 1.0kb upstream 1.0kb upstream 13433   true Chr17: 15516850-15530282 Glycine max
Glyma.17G167900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 15516850-15517849 Glycine max
Glyma.17G167900 1.0kb downstream 1.0kb downstream 13433   true Chr17: 15517850-15531282 Glycine max
Glyma.17G167900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 15530283-15531282 Glycine max
Glyma.17G167900 2.0kb upstream 2.0kb upstream 14433   true Chr17: 15515850-15530282 Glycine max
Glyma.17G167900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 15515850-15517849 Glycine max
Glyma.17G167900 2.0kb downstream 2.0kb downstream 14433   true Chr17: 15517850-15532282 Glycine max
Glyma.17G167900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 15530283-15532282 Glycine max
Glyma.17G167900 5.0kb upstream 5.0kb upstream 17433   true Chr17: 15512850-15530282 Glycine max
Glyma.17G167900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 15512850-15517849 Glycine max
Glyma.17G167900 5.0kb downstream 5.0kb downstream 17433   true Chr17: 15517850-15535282 Glycine max
Glyma.17G167900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 15530283-15535282 Glycine max
Glyma.17G167900 10.0kb upstream 10.0kb upstream 22433   true Chr17: 15507850-15530282 Glycine max
Glyma.17G167900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 15507850-15517849 Glycine max
Glyma.17G167900 10.0kb downstream 10.0kb downstream 22433   true Chr17: 15517850-15540282 Glycine max
Glyma.17G167900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 15530283-15540282 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041485 5273 Angiosperm View MSA
122301495 5265 Fabidae View MSA
124062801 5270 Rosid View MSA
123743566 5271 Pentapetalae View MSA
122785750 5272 Eudicot View MSA
121348164 5274 Embryophyte View MSA
123427779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4047 0.0 47.8776    
cufflinks 14.1291 0.0 54.1454    
cufflinks 6.94202 0.0 25.504   Low
cufflinks 9.50101 0.0 37.6543    
cufflinks 16.9346 0.0 64.771   High
cufflinks 11.0306 0.0 42.5934    
cufflinks 13.4941 0.0 51.9066    
cufflinks 10.19 0.0 39.6199    
cufflinks 11.9218 0.0 46.0879    
cufflinks 0.985        
cufflinks 0.301       Low
cufflinks 1.306        
cufflinks 2.467       High
cufflinks 3.624       High
cufflinks 0.605        
cufflinks 0.984        
cufflinks 0.782        
cufflinks 1.222        
cufflinks 1.918       High
cufflinks 0.743        
cufflinks 0.577        
cufflinks 0.856        
cufflinks 1.499        
cufflinks 0.396       Low
cufflinks 0.86        
cufflinks 0.682        

0 Strain