Gene : Glyma.17G170400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12419:SF7 - OTU DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1704
Name:  ? Glyma.17G170400 Secondary Identifier:  ? PAC:30480212
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G170400 0.5kb upstream 0.5kb upstream 18509   true Chr17: 16032051-16050559 Glycine max
Glyma.17G170400 0.5kb upstream 0.5kb upstream 500   false Chr17: 16032051-16032550 Glycine max
Glyma.17G170400 0.5kb downstream 0.5kb downstream 18509   true Chr17: 16032551-16051059 Glycine max
Glyma.17G170400 0.5kb downstream 0.5kb downstream 500   false Chr17: 16050560-16051059 Glycine max
Glyma.17G170400 1.0kb upstream 1.0kb upstream 19009   true Chr17: 16031551-16050559 Glycine max
Glyma.17G170400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 16031551-16032550 Glycine max
Glyma.17G170400 1.0kb downstream 1.0kb downstream 19009   true Chr17: 16032551-16051559 Glycine max
Glyma.17G170400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 16050560-16051559 Glycine max
Glyma.17G170400 2.0kb upstream 2.0kb upstream 20009   true Chr17: 16030551-16050559 Glycine max
Glyma.17G170400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 16030551-16032550 Glycine max
Glyma.17G170400 2.0kb downstream 2.0kb downstream 20009   true Chr17: 16032551-16052559 Glycine max
Glyma.17G170400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 16050560-16052559 Glycine max
Glyma.17G170400 5.0kb upstream 5.0kb upstream 23009   true Chr17: 16027551-16050559 Glycine max
Glyma.17G170400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 16027551-16032550 Glycine max
Glyma.17G170400 5.0kb downstream 5.0kb downstream 23009   true Chr17: 16032551-16055559 Glycine max
Glyma.17G170400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 16050560-16055559 Glycine max
Glyma.17G170400 10.0kb upstream 10.0kb upstream 28009   true Chr17: 16022551-16050559 Glycine max
Glyma.17G170400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 16022551-16032550 Glycine max
Glyma.17G170400 10.0kb downstream 10.0kb downstream 28009   true Chr17: 16032551-16060559 Glycine max
Glyma.17G170400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 16050560-16060559 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296228 5265 Fabidae View MSA
124066483 5270 Rosid View MSA
123745546 5271 Pentapetalae View MSA
122787389 5272 Eudicot View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.59999 0.0 8.56169   High
cufflinks 2.20596 0.0 7.42867    
cufflinks 2.23967 0.0 7.49194    
cufflinks 1.72982 0.0 5.95945    
cufflinks 1.19643 0.0 4.25873   Low
cufflinks 1.47511 0.0 5.16829    
cufflinks 1.85589 0.0 6.36106    
cufflinks 1.47743 0.0 5.1717    
cufflinks 1.47827 0.0 5.18105    
cufflinks 0.18        
cufflinks 0.088       Low
cufflinks 0.301        
cufflinks 0.187        
cufflinks 0.178        
cufflinks 0.196        
cufflinks 0.339        
cufflinks 0.12       Low
cufflinks 0.33        
cufflinks 0.353        
cufflinks 0.412       High
cufflinks 0.106       Low
cufflinks 0.39       High
cufflinks 0.413       High
cufflinks 0.103       Low
cufflinks 0.394       High
cufflinks 0.103       Low

0 Strain