Gene : Glyma.17G160300 G. max Wm82.a2.v1
Defline:  (1 of 8) 2.3.1.1 - Amino-acid N-acetyltransferase / N-acetylglutamate synthase Genomic Order:  1603
Name:  ? Glyma.17G160300 Secondary Identifier:  ? PAC:30479289
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSYNBSUB-PWY Glycine max pathologic  
Gmax ARGSYN-PWY Glycine max pathologic  
Gmax GLUTORN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G160300 0.5kb upstream 0.5kb upstream 8372   true Chr17: 13905215-13913586 Glycine max
Glyma.17G160300 0.5kb upstream 0.5kb upstream 500   false Chr17: 13905215-13905714 Glycine max
Glyma.17G160300 0.5kb downstream 0.5kb downstream 8372   true Chr17: 13905715-13914086 Glycine max
Glyma.17G160300 0.5kb downstream 0.5kb downstream 500   false Chr17: 13913587-13914086 Glycine max
Glyma.17G160300 1.0kb upstream 1.0kb upstream 8872   true Chr17: 13904715-13913586 Glycine max
Glyma.17G160300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13904715-13905714 Glycine max
Glyma.17G160300 1.0kb downstream 1.0kb downstream 8872   true Chr17: 13905715-13914586 Glycine max
Glyma.17G160300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13913587-13914586 Glycine max
Glyma.17G160300 2.0kb upstream 2.0kb upstream 9872   true Chr17: 13903715-13913586 Glycine max
Glyma.17G160300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13903715-13905714 Glycine max
Glyma.17G160300 2.0kb downstream 2.0kb downstream 9872   true Chr17: 13905715-13915586 Glycine max
Glyma.17G160300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13913587-13915586 Glycine max
Glyma.17G160300 5.0kb upstream 5.0kb upstream 12872   true Chr17: 13900715-13913586 Glycine max
Glyma.17G160300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13900715-13905714 Glycine max
Glyma.17G160300 5.0kb downstream 5.0kb downstream 12872   true Chr17: 13905715-13918586 Glycine max
Glyma.17G160300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13913587-13918586 Glycine max
Glyma.17G160300 10.0kb upstream 10.0kb upstream 17872   true Chr17: 13895715-13913586 Glycine max
Glyma.17G160300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13895715-13905714 Glycine max
Glyma.17G160300 10.0kb downstream 10.0kb downstream 17872   true Chr17: 13905715-13923586 Glycine max
Glyma.17G160300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13913587-13923586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311527 5265 Fabidae View MSA
124071227 5270 Rosid View MSA
123741250 5271 Pentapetalae View MSA
122788780 5272 Eudicot View MSA
122042495 5273 Angiosperm View MSA
121347122 5274 Embryophyte View MSA
123426582 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.09787 0.0 40.7822   High
cufflinks 3.91727 0.0 17.6066    
cufflinks 4.42008 0.0 19.0885    
cufflinks 3.9774 0.0 18.1097    
cufflinks 2.95766 0.0 16.9161    
cufflinks 2.09316 0.0 11.5284   Low
cufflinks 1.91364 0.0 10.8988   Low
cufflinks 3.43291 0.0 18.9296    
cufflinks 2.43675 0.0 12.7086    
cufflinks 0.257        
cufflinks 0.215        
cufflinks 0.421        
cufflinks 0.28        
cufflinks 0.354        
cufflinks 0.093       Low
cufflinks 0.352        
cufflinks 0.16       Low
cufflinks 0.541       High
cufflinks 0.352        
cufflinks 0.564       High
cufflinks 0.192        
cufflinks 0.498        
cufflinks 0.465        
cufflinks 0.236        
cufflinks 0.456        
cufflinks 0.091       Low

0 Strain