Gene : Glyma.17G152900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19282//PTHR19282:SF262 - TETRASPANIN Genomic Order:  1529
Name:  ? Glyma.17G152900 Secondary Identifier:  ? PAC:30479610
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G152900 0.5kb upstream 0.5kb upstream 5907   true Chr17: 12796039-12801945 Glycine max
Glyma.17G152900 0.5kb upstream 0.5kb upstream 500   false Chr17: 12796039-12796538 Glycine max
Glyma.17G152900 0.5kb downstream 0.5kb downstream 5907   true Chr17: 12796539-12802445 Glycine max
Glyma.17G152900 0.5kb downstream 0.5kb downstream 500   false Chr17: 12801946-12802445 Glycine max
Glyma.17G152900 1.0kb upstream 1.0kb upstream 6407   true Chr17: 12795539-12801945 Glycine max
Glyma.17G152900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 12795539-12796538 Glycine max
Glyma.17G152900 1.0kb downstream 1.0kb downstream 6407   true Chr17: 12796539-12802945 Glycine max
Glyma.17G152900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 12801946-12802945 Glycine max
Glyma.17G152900 2.0kb upstream 2.0kb upstream 7407   true Chr17: 12794539-12801945 Glycine max
Glyma.17G152900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 12794539-12796538 Glycine max
Glyma.17G152900 2.0kb downstream 2.0kb downstream 7407   true Chr17: 12796539-12803945 Glycine max
Glyma.17G152900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 12801946-12803945 Glycine max
Glyma.17G152900 5.0kb upstream 5.0kb upstream 10407   true Chr17: 12791539-12801945 Glycine max
Glyma.17G152900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 12791539-12796538 Glycine max
Glyma.17G152900 5.0kb downstream 5.0kb downstream 10407   true Chr17: 12796539-12806945 Glycine max
Glyma.17G152900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 12801946-12806945 Glycine max
Glyma.17G152900 10.0kb upstream 10.0kb upstream 15407   true Chr17: 12786539-12801945 Glycine max
Glyma.17G152900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 12786539-12796538 Glycine max
Glyma.17G152900 10.0kb downstream 10.0kb downstream 15407   true Chr17: 12796539-12811945 Glycine max
Glyma.17G152900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 12801946-12811945 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298697 5265 Fabidae View MSA
124065519 5270 Rosid View MSA
123751107 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4621 0.0 40.3908   Low
cufflinks 19.4838 0.0 66.0957    
cufflinks 18.4139 0.0 64.5755    
cufflinks 17.3675 0.0 58.9705    
cufflinks 15.441 0.0 53.3574    
cufflinks 39.9301 0.0 143.115 High High
cufflinks 16.7879 0.0 50.2735    
cufflinks 19.1213 0.0 65.9525    
cufflinks 23.9438 0.0 82.8472 High  
cufflinks 3.821       High
cufflinks 2.983        
cufflinks 3.341        
cufflinks 2.717        
cufflinks 1.962        
cufflinks 2.237        
cufflinks 2.47        
cufflinks 1.368       Low
cufflinks 5.114       High
cufflinks 3.06        
cufflinks 2.635        
cufflinks 2.451        
cufflinks 2.517        
cufflinks 2.012        
cufflinks 2.888        
cufflinks 2.62        
cufflinks 1.921       Low

0 Strain