Gene : Glyma.17G154900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19370:SF109 - FERREDOXIN C2 Genomic Order:  1549
Name:  ? Glyma.17G154900 Secondary Identifier:  ? PAC:30480851
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G154900 0.5kb upstream 0.5kb upstream 5219   true Chr17: 13079959-13085177 Glycine max
Glyma.17G154900 0.5kb upstream 0.5kb upstream 500   false Chr17: 13084678-13085177 Glycine max
Glyma.17G154900 0.5kb downstream 0.5kb downstream 5219   true Chr17: 13079459-13084677 Glycine max
Glyma.17G154900 0.5kb downstream 0.5kb downstream 500   false Chr17: 13079459-13079958 Glycine max
Glyma.17G154900 1.0kb upstream 1.0kb upstream 5719   true Chr17: 13079959-13085677 Glycine max
Glyma.17G154900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13084678-13085677 Glycine max
Glyma.17G154900 1.0kb downstream 1.0kb downstream 5719   true Chr17: 13078959-13084677 Glycine max
Glyma.17G154900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13078959-13079958 Glycine max
Glyma.17G154900 2.0kb upstream 2.0kb upstream 6719   true Chr17: 13079959-13086677 Glycine max
Glyma.17G154900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13084678-13086677 Glycine max
Glyma.17G154900 2.0kb downstream 2.0kb downstream 6719   true Chr17: 13077959-13084677 Glycine max
Glyma.17G154900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13077959-13079958 Glycine max
Glyma.17G154900 5.0kb upstream 5.0kb upstream 9719   true Chr17: 13079959-13089677 Glycine max
Glyma.17G154900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13084678-13089677 Glycine max
Glyma.17G154900 5.0kb downstream 5.0kb downstream 9719   true Chr17: 13074959-13084677 Glycine max
Glyma.17G154900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13074959-13079958 Glycine max
Glyma.17G154900 10.0kb upstream 10.0kb upstream 14719   true Chr17: 13079959-13094677 Glycine max
Glyma.17G154900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13084678-13094677 Glycine max
Glyma.17G154900 10.0kb downstream 10.0kb downstream 14719   true Chr17: 13069959-13084677 Glycine max
Glyma.17G154900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13069959-13079958 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306518 5265 Fabidae View MSA
124062702 5270 Rosid View MSA
123739911 5271 Pentapetalae View MSA
122791268 5272 Eudicot View MSA
122047270 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121344610 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2897 0.0 57.725   High
cufflinks 13.7828 0.0 38.7622    
cufflinks 4.00532 0.0 13.296    
cufflinks 7.81713 0.0 23.6083    
cufflinks 2.32739 0.0 8.14542    
cufflinks 2.56654 0.0 8.91702    
cufflinks 34.4813 0.0 92.0318 High High
cufflinks 6.11286 0.0 19.1097    
cufflinks 1.2262 0.0 4.49141   Low
cufflinks 0.64        
cufflinks 0.221        
cufflinks 0.535        
cufflinks 0.144        
cufflinks 0.023     Low Low
cufflinks 0.203        
cufflinks 3.519       High
cufflinks 0.183        
cufflinks 0.642        
cufflinks 0.981        
cufflinks 3.885       High
cufflinks 0.191        
cufflinks 3.563       High
cufflinks 2.703       High
cufflinks 0.241        
cufflinks 3.481       High
cufflinks 0.206        

0 Strain