Gene : Glyma.17G142700 G. max Wm82.a2.v1
Defline:  (1 of 21) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  1427
Name:  ? Glyma.17G142700 Secondary Identifier:  ? PAC:30481282
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G142700 0.5kb upstream 0.5kb upstream 9187   true Chr17: 11602589-11611775 Glycine max
Glyma.17G142700 0.5kb upstream 0.5kb upstream 500   false Chr17: 11611276-11611775 Glycine max
Glyma.17G142700 0.5kb downstream 0.5kb downstream 9187   true Chr17: 11602089-11611275 Glycine max
Glyma.17G142700 0.5kb downstream 0.5kb downstream 500   false Chr17: 11602089-11602588 Glycine max
Glyma.17G142700 1.0kb upstream 1.0kb upstream 9687   true Chr17: 11602589-11612275 Glycine max
Glyma.17G142700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11611276-11612275 Glycine max
Glyma.17G142700 1.0kb downstream 1.0kb downstream 9687   true Chr17: 11601589-11611275 Glycine max
Glyma.17G142700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11601589-11602588 Glycine max
Glyma.17G142700 2.0kb upstream 2.0kb upstream 10687   true Chr17: 11602589-11613275 Glycine max
Glyma.17G142700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11611276-11613275 Glycine max
Glyma.17G142700 2.0kb downstream 2.0kb downstream 10687   true Chr17: 11600589-11611275 Glycine max
Glyma.17G142700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11600589-11602588 Glycine max
Glyma.17G142700 5.0kb upstream 5.0kb upstream 13687   true Chr17: 11602589-11616275 Glycine max
Glyma.17G142700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11611276-11616275 Glycine max
Glyma.17G142700 5.0kb downstream 5.0kb downstream 13687   true Chr17: 11597589-11611275 Glycine max
Glyma.17G142700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11597589-11602588 Glycine max
Glyma.17G142700 10.0kb upstream 10.0kb upstream 18687   true Chr17: 11602589-11621275 Glycine max
Glyma.17G142700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11611276-11621275 Glycine max
Glyma.17G142700 10.0kb downstream 10.0kb downstream 18687   true Chr17: 11592589-11611275 Glycine max
Glyma.17G142700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11592589-11602588 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311957 5265 Fabidae View MSA
124069316 5270 Rosid View MSA
123741227 5271 Pentapetalae View MSA
122791829 5272 Eudicot View MSA
122043072 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.95675 0.0 11.2098    
cufflinks 5.85985 0.0 26.4583   High
cufflinks 1.30636 0.0 7.88607    
cufflinks 1.18749 0.0 9.57589    
cufflinks 0.289258 0.0 1.88962    
cufflinks 0.725587 0.0 3.19484    
cufflinks 1.28235 0.0 6.62966    
cufflinks 1.49613 0.0 10.5398    
cufflinks 0.0109273 0.0 0.0583823 Low Low
cufflinks 0.108        
cufflinks 0.001     Low Low
cufflinks 0.179        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.004     Low Low
cufflinks 0.575        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.424        
cufflinks 0.255        
cufflinks 0.887        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.919        
cufflinks 0.634        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.662        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain