Gene : Glyma.17G143500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11062:SF59 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  1435
Name:  ? Glyma.17G143500 Secondary Identifier:  ? PAC:30480791
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5980 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G143500 0.5kb upstream 0.5kb upstream 12385   true Chr17: 11661490-11673874 Glycine max
Glyma.17G143500 0.5kb upstream 0.5kb upstream 500   false Chr17: 11661490-11661989 Glycine max
Glyma.17G143500 0.5kb downstream 0.5kb downstream 12385   true Chr17: 11661990-11674374 Glycine max
Glyma.17G143500 0.5kb downstream 0.5kb downstream 500   false Chr17: 11673875-11674374 Glycine max
Glyma.17G143500 1.0kb upstream 1.0kb upstream 12885   true Chr17: 11660990-11673874 Glycine max
Glyma.17G143500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11660990-11661989 Glycine max
Glyma.17G143500 1.0kb downstream 1.0kb downstream 12885   true Chr17: 11661990-11674874 Glycine max
Glyma.17G143500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11673875-11674874 Glycine max
Glyma.17G143500 2.0kb upstream 2.0kb upstream 13885   true Chr17: 11659990-11673874 Glycine max
Glyma.17G143500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11659990-11661989 Glycine max
Glyma.17G143500 2.0kb downstream 2.0kb downstream 13885   true Chr17: 11661990-11675874 Glycine max
Glyma.17G143500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11673875-11675874 Glycine max
Glyma.17G143500 5.0kb upstream 5.0kb upstream 16885   true Chr17: 11656990-11673874 Glycine max
Glyma.17G143500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11656990-11661989 Glycine max
Glyma.17G143500 5.0kb downstream 5.0kb downstream 16885   true Chr17: 11661990-11678874 Glycine max
Glyma.17G143500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11673875-11678874 Glycine max
Glyma.17G143500 10.0kb upstream 10.0kb upstream 21885   true Chr17: 11651990-11673874 Glycine max
Glyma.17G143500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11651990-11661989 Glycine max
Glyma.17G143500 10.0kb downstream 10.0kb downstream 21885   true Chr17: 11661990-11683874 Glycine max
Glyma.17G143500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11673875-11683874 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303502 5265 Fabidae View MSA
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.09688 0.0 11.9291    
cufflinks 2.43108 0.0 10.0904   Low
cufflinks 4.03066 0.0 16.9485    
cufflinks 3.28866 0.0 12.3551    
cufflinks 3.42693 0.0 15.089    
cufflinks 5.48996 0.0 18.9238   High
cufflinks 2.86246 0.0 13.3443    
cufflinks 3.26172 0.0 14.6788    
cufflinks 3.65893 0.0 13.3568    
cufflinks 0.255        
cufflinks 0.339       High
cufflinks 0.311        
cufflinks 0.326        
cufflinks 0.321        
cufflinks 0.234        
cufflinks 0.192       Low
cufflinks 0.248        
cufflinks 0.335        
cufflinks 0.171       Low
cufflinks 0.175       Low
cufflinks 0.291        
cufflinks 0.205        
cufflinks 0.212        
cufflinks 0.407       High
cufflinks 0.181       Low
cufflinks 0.324        

0 Strain