Gene : Glyma.17G200600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32093:SF13 - SERINE/ARGININE REPETITIVE MATRIX PROTEIN 2 Genomic Order:  2006
Name:  ? Glyma.17G200600 Secondary Identifier:  ? PAC:30479983
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G200600 0.5kb upstream 0.5kb upstream 5402   true Chr17: 31904845-31910246 Glycine max
Glyma.17G200600 0.5kb upstream 0.5kb upstream 500   false Chr17: 31904845-31905344 Glycine max
Glyma.17G200600 0.5kb downstream 0.5kb downstream 5402   true Chr17: 31905345-31910746 Glycine max
Glyma.17G200600 0.5kb downstream 0.5kb downstream 500   false Chr17: 31910247-31910746 Glycine max
Glyma.17G200600 1.0kb upstream 1.0kb upstream 5902   true Chr17: 31904345-31910246 Glycine max
Glyma.17G200600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 31904345-31905344 Glycine max
Glyma.17G200600 1.0kb downstream 1.0kb downstream 5902   true Chr17: 31905345-31911246 Glycine max
Glyma.17G200600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 31910247-31911246 Glycine max
Glyma.17G200600 2.0kb upstream 2.0kb upstream 6902   true Chr17: 31903345-31910246 Glycine max
Glyma.17G200600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 31903345-31905344 Glycine max
Glyma.17G200600 2.0kb downstream 2.0kb downstream 6902   true Chr17: 31905345-31912246 Glycine max
Glyma.17G200600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 31910247-31912246 Glycine max
Glyma.17G200600 5.0kb upstream 5.0kb upstream 9902   true Chr17: 31900345-31910246 Glycine max
Glyma.17G200600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 31900345-31905344 Glycine max
Glyma.17G200600 5.0kb downstream 5.0kb downstream 9902   true Chr17: 31905345-31915246 Glycine max
Glyma.17G200600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 31910247-31915246 Glycine max
Glyma.17G200600 10.0kb upstream 10.0kb upstream 14902   true Chr17: 31895345-31910246 Glycine max
Glyma.17G200600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 31895345-31905344 Glycine max
Glyma.17G200600 10.0kb downstream 10.0kb downstream 14902   true Chr17: 31905345-31920246 Glycine max
Glyma.17G200600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 31910247-31920246 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310746 5265 Fabidae View MSA
124069039 5270 Rosid View MSA
123741456 5271 Pentapetalae View MSA
122788906 5272 Eudicot View MSA
122043009 5273 Angiosperm View MSA
121350185 5274 Embryophyte View MSA
123426025 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4711 0.0 41.7197    
cufflinks 14.8877 0.0 40.0522    
cufflinks 23.1184 0.0 64.4461 High High
cufflinks 11.5695 0.0 30.9193    
cufflinks 9.16943 0.0 24.4728    
cufflinks 10.5273 0.0 28.088    
cufflinks 8.49907 0.0 22.7079   Low
cufflinks 12.0939 0.0 32.3389    
cufflinks 10.3114 0.0 27.51    
cufflinks 9.662     High Low
cufflinks 15.494     High  
cufflinks 21.84     High High
cufflinks 10.81     High  
cufflinks 9.656     High Low
cufflinks 14.242     High  
cufflinks 21.713     High High
cufflinks 7.847     High Low
cufflinks 14.645     High  
cufflinks 15.397     High  
cufflinks 24.307     High High
cufflinks 13.647     High  
cufflinks 23.71     High High
cufflinks 15.899     High  
cufflinks 16.374     High  
cufflinks 23.538     High High
cufflinks 13.487     High  

0 Strain