Gene : Glyma.17G200700 G. max Wm82.a2.v1
Defline:  (1 of 9) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  2007
Name:  ? Glyma.17G200700 Secondary Identifier:  ? PAC:30478589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G200700 0.5kb upstream 0.5kb upstream 6307   true Chr17: 31912281-31918587 Glycine max
Glyma.17G200700 0.5kb upstream 0.5kb upstream 500   false Chr17: 31918088-31918587 Glycine max
Glyma.17G200700 0.5kb downstream 0.5kb downstream 6307   true Chr17: 31911781-31918087 Glycine max
Glyma.17G200700 0.5kb downstream 0.5kb downstream 500   false Chr17: 31911781-31912280 Glycine max
Glyma.17G200700 1.0kb upstream 1.0kb upstream 6807   true Chr17: 31912281-31919087 Glycine max
Glyma.17G200700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 31918088-31919087 Glycine max
Glyma.17G200700 1.0kb downstream 1.0kb downstream 6807   true Chr17: 31911281-31918087 Glycine max
Glyma.17G200700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 31911281-31912280 Glycine max
Glyma.17G200700 2.0kb upstream 2.0kb upstream 7807   true Chr17: 31912281-31920087 Glycine max
Glyma.17G200700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 31918088-31920087 Glycine max
Glyma.17G200700 2.0kb downstream 2.0kb downstream 7807   true Chr17: 31910281-31918087 Glycine max
Glyma.17G200700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 31910281-31912280 Glycine max
Glyma.17G200700 5.0kb upstream 5.0kb upstream 10807   true Chr17: 31912281-31923087 Glycine max
Glyma.17G200700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 31918088-31923087 Glycine max
Glyma.17G200700 5.0kb downstream 5.0kb downstream 10807   true Chr17: 31907281-31918087 Glycine max
Glyma.17G200700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 31907281-31912280 Glycine max
Glyma.17G200700 10.0kb upstream 10.0kb upstream 15807   true Chr17: 31912281-31928087 Glycine max
Glyma.17G200700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 31918088-31928087 Glycine max
Glyma.17G200700 10.0kb downstream 10.0kb downstream 15807   true Chr17: 31902281-31918087 Glycine max
Glyma.17G200700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 31902281-31912280 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299585 5265 Fabidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02763 0.0 11.4298    
cufflinks 6.01656 0.0 33.0785   High
cufflinks 0.816525 0.0 5.95056   Low
cufflinks 3.21046 0.0 22.5553    
cufflinks 1.01762 0.0 7.61253    
cufflinks 0.855883 0.0 5.4536    
cufflinks 3.11878 0.0 18.8784    
cufflinks 1.72827 0.0 12.3252    
cufflinks 0.816452 0.0 6.25338   Low
cufflinks 0.068     Low  
cufflinks 0.003     Low Low
cufflinks 0.052     Low  
cufflinks 0.008     Low  
cufflinks 0.019     Low  
cufflinks 0.001     Low Low
cufflinks 0.219       High
cufflinks 0.008     Low  
cufflinks 0.154        
cufflinks 0.124        
cufflinks 0.201       High
cufflinks 0.007     Low  
cufflinks 0.197       High
cufflinks 0.231       High
cufflinks 0.002     Low Low
cufflinks 0.216       High
cufflinks 0.006     Low  

0 Strain