Gene : Glyma.17G187800 G. max Wm82.a2.v1
Defline:  (1 of 217) PF05699 - hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) Genomic Order:  1878
Name:  ? Glyma.17G187800 Secondary Identifier:  ? PAC:30482078
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G187800 0.5kb upstream 0.5kb upstream 2871   true Chr17: 24184991-24187861 Glycine max
Glyma.17G187800 0.5kb upstream 0.5kb upstream 500   false Chr17: 24187362-24187861 Glycine max
Glyma.17G187800 0.5kb downstream 0.5kb downstream 2871   true Chr17: 24184491-24187361 Glycine max
Glyma.17G187800 0.5kb downstream 0.5kb downstream 500   false Chr17: 24184491-24184990 Glycine max
Glyma.17G187800 1.0kb upstream 1.0kb upstream 3371   true Chr17: 24184991-24188361 Glycine max
Glyma.17G187800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 24187362-24188361 Glycine max
Glyma.17G187800 1.0kb downstream 1.0kb downstream 3371   true Chr17: 24183991-24187361 Glycine max
Glyma.17G187800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 24183991-24184990 Glycine max
Glyma.17G187800 2.0kb upstream 2.0kb upstream 4371   true Chr17: 24184991-24189361 Glycine max
Glyma.17G187800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 24187362-24189361 Glycine max
Glyma.17G187800 2.0kb downstream 2.0kb downstream 4371   true Chr17: 24182991-24187361 Glycine max
Glyma.17G187800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 24182991-24184990 Glycine max
Glyma.17G187800 5.0kb upstream 5.0kb upstream 7371   true Chr17: 24184991-24192361 Glycine max
Glyma.17G187800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 24187362-24192361 Glycine max
Glyma.17G187800 5.0kb downstream 5.0kb downstream 7371   true Chr17: 24179991-24187361 Glycine max
Glyma.17G187800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 24179991-24184990 Glycine max
Glyma.17G187800 10.0kb upstream 10.0kb upstream 12371   true Chr17: 24184991-24197361 Glycine max
Glyma.17G187800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 24187362-24197361 Glycine max
Glyma.17G187800 10.0kb downstream 10.0kb downstream 12371   true Chr17: 24174991-24187361 Glycine max
Glyma.17G187800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 24174991-24184990 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313005 5265 Fabidae View MSA
124071231 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00945471 0.0 0.0443181 Low  
cufflinks 0.0268545 0.0 0.114474 Low  
cufflinks 0.00922865 0.0 0.0434441 Low  
cufflinks 0.0288938 0.0 0.122392 Low  
cufflinks 0.0238641 0.0 0.102641 Low  
cufflinks 3.09532E-5 0.0 0.00128362 Low Low
cufflinks 1.23202E-5 0.0 8.05464E-4 Low Low
cufflinks 0.0146423 0.0 0.0656555 Low  
cufflinks 0.0497259 0.0 0.203497 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain