Gene : Glyma.17G178400 G. max Wm82.a2.v1
Defline:  (1 of 281) PF05970 - PIF1-like helicase (PIF1) Genomic Order:  1784
Name:  ? Glyma.17G178400 Secondary Identifier:  ? PAC:30479998
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G178400 0.5kb upstream 0.5kb upstream 1357   true Chr17: 19317156-19318512 Glycine max
Glyma.17G178400 0.5kb upstream 0.5kb upstream 500   false Chr17: 19318013-19318512 Glycine max
Glyma.17G178400 0.5kb downstream 0.5kb downstream 1357   true Chr17: 19316656-19318012 Glycine max
Glyma.17G178400 0.5kb downstream 0.5kb downstream 500   false Chr17: 19316656-19317155 Glycine max
Glyma.17G178400 1.0kb upstream 1.0kb upstream 1857   true Chr17: 19317156-19319012 Glycine max
Glyma.17G178400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 19318013-19319012 Glycine max
Glyma.17G178400 1.0kb downstream 1.0kb downstream 1857   true Chr17: 19316156-19318012 Glycine max
Glyma.17G178400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 19316156-19317155 Glycine max
Glyma.17G178400 2.0kb upstream 2.0kb upstream 2857   true Chr17: 19317156-19320012 Glycine max
Glyma.17G178400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 19318013-19320012 Glycine max
Glyma.17G178400 2.0kb downstream 2.0kb downstream 2857   true Chr17: 19315156-19318012 Glycine max
Glyma.17G178400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 19315156-19317155 Glycine max
Glyma.17G178400 5.0kb upstream 5.0kb upstream 5857   true Chr17: 19317156-19323012 Glycine max
Glyma.17G178400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 19318013-19323012 Glycine max
Glyma.17G178400 5.0kb downstream 5.0kb downstream 5857   true Chr17: 19312156-19318012 Glycine max
Glyma.17G178400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 19312156-19317155 Glycine max
Glyma.17G178400 10.0kb upstream 10.0kb upstream 10857   true Chr17: 19317156-19328012 Glycine max
Glyma.17G178400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 19318013-19328012 Glycine max
Glyma.17G178400 10.0kb downstream 10.0kb downstream 10857   true Chr17: 19307156-19318012 Glycine max
Glyma.17G178400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 19307156-19317155 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122315190 5265 Fabidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain