Gene : Glyma.17G228800 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  2288
Name:  ? Glyma.17G228800 Secondary Identifier:  ? PAC:30479512
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYCLEAV-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G228800 0.5kb upstream 0.5kb upstream 7093   true Chr17: 38382684-38389776 Glycine max
Glyma.17G228800 0.5kb upstream 0.5kb upstream 500   false Chr17: 38382684-38383183 Glycine max
Glyma.17G228800 0.5kb downstream 0.5kb downstream 7093   true Chr17: 38383184-38390276 Glycine max
Glyma.17G228800 0.5kb downstream 0.5kb downstream 500   false Chr17: 38389777-38390276 Glycine max
Glyma.17G228800 1.0kb upstream 1.0kb upstream 7593   true Chr17: 38382184-38389776 Glycine max
Glyma.17G228800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38382184-38383183 Glycine max
Glyma.17G228800 1.0kb downstream 1.0kb downstream 7593   true Chr17: 38383184-38390776 Glycine max
Glyma.17G228800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38389777-38390776 Glycine max
Glyma.17G228800 2.0kb upstream 2.0kb upstream 8593   true Chr17: 38381184-38389776 Glycine max
Glyma.17G228800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38381184-38383183 Glycine max
Glyma.17G228800 2.0kb downstream 2.0kb downstream 8593   true Chr17: 38383184-38391776 Glycine max
Glyma.17G228800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38389777-38391776 Glycine max
Glyma.17G228800 5.0kb upstream 5.0kb upstream 11593   true Chr17: 38378184-38389776 Glycine max
Glyma.17G228800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38378184-38383183 Glycine max
Glyma.17G228800 5.0kb downstream 5.0kb downstream 11593   true Chr17: 38383184-38394776 Glycine max
Glyma.17G228800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38389777-38394776 Glycine max
Glyma.17G228800 10.0kb upstream 10.0kb upstream 16593   true Chr17: 38373184-38389776 Glycine max
Glyma.17G228800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38373184-38383183 Glycine max
Glyma.17G228800 10.0kb downstream 10.0kb downstream 16593   true Chr17: 38383184-38399776 Glycine max
Glyma.17G228800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38389777-38399776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304426 5265 Fabidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 176.134 0.0 1776.21 High High
cufflinks 33.3735 0.0 125.655 High  
cufflinks 6.55216 0.0 19.5327   Low
cufflinks 20.7668 0.0 82.8548 High  
cufflinks 21.5395 0.0 85.1676 High  
cufflinks 5.24785 0.0 15.9109   Low
cufflinks 10.7311 0.0 32.348    
cufflinks 30.6198 0.0 113.32 High  
cufflinks 36.4073 0.0 146.292 High  
cufflinks 11.602     High  
cufflinks 0.389       Low
cufflinks 2.548        
cufflinks 4.967        
cufflinks 3.486        
cufflinks 11.976     High  
cufflinks 47.574     High High
cufflinks 1.85        
cufflinks 2.327        
cufflinks 12.274     High  
cufflinks 41.734     High High
cufflinks 0.991       Low
cufflinks 51.185     High High
cufflinks 32.29     High High
cufflinks 0.632       Low
cufflinks 47.369     High High
cufflinks 2.936        

0 Strain