Gene : Glyma.17G230100 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Genomic Order:  2301
Name:  ? Glyma.17G230100 Secondary Identifier:  ? PAC:30480200
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G230100 0.5kb upstream 0.5kb upstream 5027   true Chr17: 38514544-38519570 Glycine max
Glyma.17G230100 0.5kb upstream 0.5kb upstream 500   false Chr17: 38519071-38519570 Glycine max
Glyma.17G230100 0.5kb downstream 0.5kb downstream 5027   true Chr17: 38514044-38519070 Glycine max
Glyma.17G230100 0.5kb downstream 0.5kb downstream 500   false Chr17: 38514044-38514543 Glycine max
Glyma.17G230100 1.0kb upstream 1.0kb upstream 5527   true Chr17: 38514544-38520070 Glycine max
Glyma.17G230100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38519071-38520070 Glycine max
Glyma.17G230100 1.0kb downstream 1.0kb downstream 5527   true Chr17: 38513544-38519070 Glycine max
Glyma.17G230100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38513544-38514543 Glycine max
Glyma.17G230100 2.0kb upstream 2.0kb upstream 6527   true Chr17: 38514544-38521070 Glycine max
Glyma.17G230100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38519071-38521070 Glycine max
Glyma.17G230100 2.0kb downstream 2.0kb downstream 6527   true Chr17: 38512544-38519070 Glycine max
Glyma.17G230100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38512544-38514543 Glycine max
Glyma.17G230100 5.0kb upstream 5.0kb upstream 9527   true Chr17: 38514544-38524070 Glycine max
Glyma.17G230100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38519071-38524070 Glycine max
Glyma.17G230100 5.0kb downstream 5.0kb downstream 9527   true Chr17: 38509544-38519070 Glycine max
Glyma.17G230100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38509544-38514543 Glycine max
Glyma.17G230100 10.0kb upstream 10.0kb upstream 14527   true Chr17: 38514544-38529070 Glycine max
Glyma.17G230100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38519071-38529070 Glycine max
Glyma.17G230100 10.0kb downstream 10.0kb downstream 14527   true Chr17: 38504544-38519070 Glycine max
Glyma.17G230100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38504544-38514543 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310930 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6573 0.0 29.0619    
cufflinks 7.25835 0.0 20.4274    
cufflinks 3.5671 0.0 10.9354   Low
cufflinks 14.5269 0.0 38.9881   High
cufflinks 9.77394 0.0 26.8385    
cufflinks 7.2421 0.0 20.3917    
cufflinks 6.9071 0.0 19.608    
cufflinks 10.5873 0.0 28.8714    
cufflinks 8.49446 0.0 23.5474    
cufflinks 8.163     High High
cufflinks 0.534       Low
cufflinks 3.075        
cufflinks 7.914     High  
cufflinks 4.381        
cufflinks 0.925       Low
cufflinks 5.763        
cufflinks 5.308        
cufflinks 5.597        
cufflinks 3.604        
cufflinks 4.949        
cufflinks 0.585       Low
cufflinks 6.241        
cufflinks 7.163        
cufflinks 0.455       Low
cufflinks 4.337        
cufflinks 1.546        

0 Strain