Gene : Glyma.17G231600 G. max Wm82.a2.v1
Defline:  (1 of 3) K12125 - protein EARLY FLOWERING 3 Genomic Order:  2316
Name:  ? Glyma.17G231600 Secondary Identifier:  ? PAC:30480656
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G231600 0.5kb upstream 0.5kb upstream 5417   true Chr17: 38644593-38650009 Glycine max
Glyma.17G231600 0.5kb upstream 0.5kb upstream 500   false Chr17: 38649510-38650009 Glycine max
Glyma.17G231600 0.5kb downstream 0.5kb downstream 5417   true Chr17: 38644093-38649509 Glycine max
Glyma.17G231600 0.5kb downstream 0.5kb downstream 500   false Chr17: 38644093-38644592 Glycine max
Glyma.17G231600 1.0kb upstream 1.0kb upstream 5917   true Chr17: 38644593-38650509 Glycine max
Glyma.17G231600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38649510-38650509 Glycine max
Glyma.17G231600 1.0kb downstream 1.0kb downstream 5917   true Chr17: 38643593-38649509 Glycine max
Glyma.17G231600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38643593-38644592 Glycine max
Glyma.17G231600 2.0kb upstream 2.0kb upstream 6917   true Chr17: 38644593-38651509 Glycine max
Glyma.17G231600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38649510-38651509 Glycine max
Glyma.17G231600 2.0kb downstream 2.0kb downstream 6917   true Chr17: 38642593-38649509 Glycine max
Glyma.17G231600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38642593-38644592 Glycine max
Glyma.17G231600 5.0kb upstream 5.0kb upstream 9917   true Chr17: 38644593-38654509 Glycine max
Glyma.17G231600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38649510-38654509 Glycine max
Glyma.17G231600 5.0kb downstream 5.0kb downstream 9917   true Chr17: 38639593-38649509 Glycine max
Glyma.17G231600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38639593-38644592 Glycine max
Glyma.17G231600 10.0kb upstream 10.0kb upstream 14917   true Chr17: 38644593-38659509 Glycine max
Glyma.17G231600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38649510-38659509 Glycine max
Glyma.17G231600 10.0kb downstream 10.0kb downstream 14917   true Chr17: 38634593-38649509 Glycine max
Glyma.17G231600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38634593-38644592 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308024 5265 Fabidae View MSA
124071157 5270 Rosid View MSA
123751825 5271 Pentapetalae View MSA
122796680 5272 Eudicot View MSA
122044272 5273 Angiosperm View MSA
121350755 5274 Embryophyte View MSA
123381878 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4053 0.0 30.4279    
cufflinks 13.6091 0.0 36.3666    
cufflinks 17.7321 0.0 47.8389   High
cufflinks 10.2249 0.0 27.2902    
cufflinks 7.46793 0.0 20.1052   Low
cufflinks 7.21877 0.0 19.4603   Low
cufflinks 15.0127 0.0 40.2026   High
cufflinks 9.87638 0.0 26.3702    
cufflinks 8.59219 0.0 23.0133    
cufflinks 7.223        
cufflinks 11.171     High  
cufflinks 10.741     High  
cufflinks 4.024       Low
cufflinks 3.869       Low
cufflinks 8.568     High  
cufflinks 9.79     High  
cufflinks 5.929        
cufflinks 12.408     High High
cufflinks 10.801     High  
cufflinks 12.207     High High
cufflinks 7.189     High  
cufflinks 10.492     High  
cufflinks 8.856     High  
cufflinks 10.209     High  
cufflinks 10.483     High  
cufflinks 6.022        

0 Strain