Gene : Glyma.17G232600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31602:SF2 - GROWTH-REGULATING FACTOR 1-RELATED Genomic Order:  2326
Name:  ? Glyma.17G232600 Secondary Identifier:  ? PAC:30481078
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G232600 0.5kb upstream 0.5kb upstream 5444   true Chr17: 38792470-38797913 Glycine max
Glyma.17G232600 0.5kb upstream 0.5kb upstream 500   false Chr17: 38792470-38792969 Glycine max
Glyma.17G232600 0.5kb downstream 0.5kb downstream 5444   true Chr17: 38792970-38798413 Glycine max
Glyma.17G232600 0.5kb downstream 0.5kb downstream 500   false Chr17: 38797914-38798413 Glycine max
Glyma.17G232600 1.0kb upstream 1.0kb upstream 5944   true Chr17: 38791970-38797913 Glycine max
Glyma.17G232600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38791970-38792969 Glycine max
Glyma.17G232600 1.0kb downstream 1.0kb downstream 5944   true Chr17: 38792970-38798913 Glycine max
Glyma.17G232600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38797914-38798913 Glycine max
Glyma.17G232600 2.0kb upstream 2.0kb upstream 6944   true Chr17: 38790970-38797913 Glycine max
Glyma.17G232600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38790970-38792969 Glycine max
Glyma.17G232600 2.0kb downstream 2.0kb downstream 6944   true Chr17: 38792970-38799913 Glycine max
Glyma.17G232600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38797914-38799913 Glycine max
Glyma.17G232600 5.0kb upstream 5.0kb upstream 9944   true Chr17: 38787970-38797913 Glycine max
Glyma.17G232600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38787970-38792969 Glycine max
Glyma.17G232600 5.0kb downstream 5.0kb downstream 9944   true Chr17: 38792970-38802913 Glycine max
Glyma.17G232600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38797914-38802913 Glycine max
Glyma.17G232600 10.0kb upstream 10.0kb upstream 14944   true Chr17: 38782970-38797913 Glycine max
Glyma.17G232600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38782970-38792969 Glycine max
Glyma.17G232600 10.0kb downstream 10.0kb downstream 14944   true Chr17: 38792970-38807913 Glycine max
Glyma.17G232600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38797914-38807913 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305476 5265 Fabidae View MSA
124070483 5270 Rosid View MSA
123751333 5271 Pentapetalae View MSA
122792391 5272 Eudicot View MSA
122044407 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30182 0.0 7.00449    
cufflinks 48.0445 0.0 142.692 High High
cufflinks 4.47483 0.0 12.4978    
cufflinks 2.31844 0.0 7.02588    
cufflinks 9.23861 0.0 24.7329    
cufflinks 6.2148 0.0 16.9384    
cufflinks 13.6165 0.0 36.3654    
cufflinks 2.28271 0.0 6.90619    
cufflinks 2.93443 0.0 8.61726    
cufflinks 1.362        
cufflinks 0.845        
cufflinks 2.872        
cufflinks 5.843        
cufflinks 8.245     High  
cufflinks 0.363       Low
cufflinks 13.09     High High
cufflinks 0.803        
cufflinks 0.597       Low
cufflinks 30.931     High High
cufflinks 8.949     High  
cufflinks 1.04        
cufflinks 11.76     High  
cufflinks 14.295     High High
cufflinks 0.716       Low
cufflinks 7.562     High  
cufflinks 1.916        

0 Strain