Gene : Glyma.17G223200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10766:SF46 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  2232
Name:  ? Glyma.17G223200 Secondary Identifier:  ? PAC:30479302
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G223200 0.5kb upstream 0.5kb upstream 4759   true Chr17: 37649185-37653943 Glycine max
Glyma.17G223200 0.5kb upstream 0.5kb upstream 500   false Chr17: 37649185-37649684 Glycine max
Glyma.17G223200 0.5kb downstream 0.5kb downstream 4759   true Chr17: 37649685-37654443 Glycine max
Glyma.17G223200 0.5kb downstream 0.5kb downstream 500   false Chr17: 37653944-37654443 Glycine max
Glyma.17G223200 1.0kb upstream 1.0kb upstream 5259   true Chr17: 37648685-37653943 Glycine max
Glyma.17G223200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 37648685-37649684 Glycine max
Glyma.17G223200 1.0kb downstream 1.0kb downstream 5259   true Chr17: 37649685-37654943 Glycine max
Glyma.17G223200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 37653944-37654943 Glycine max
Glyma.17G223200 2.0kb upstream 2.0kb upstream 6259   true Chr17: 37647685-37653943 Glycine max
Glyma.17G223200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 37647685-37649684 Glycine max
Glyma.17G223200 2.0kb downstream 2.0kb downstream 6259   true Chr17: 37649685-37655943 Glycine max
Glyma.17G223200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 37653944-37655943 Glycine max
Glyma.17G223200 5.0kb upstream 5.0kb upstream 9259   true Chr17: 37644685-37653943 Glycine max
Glyma.17G223200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37644685-37649684 Glycine max
Glyma.17G223200 5.0kb downstream 5.0kb downstream 9259   true Chr17: 37649685-37658943 Glycine max
Glyma.17G223200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 37653944-37658943 Glycine max
Glyma.17G223200 10.0kb upstream 10.0kb upstream 14259   true Chr17: 37639685-37653943 Glycine max
Glyma.17G223200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37639685-37649684 Glycine max
Glyma.17G223200 10.0kb downstream 10.0kb downstream 14259   true Chr17: 37649685-37663943 Glycine max
Glyma.17G223200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 37653944-37663943 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313457 5265 Fabidae View MSA
124067102 5270 Rosid View MSA
123742579 5271 Pentapetalae View MSA
122788087 5272 Eudicot View MSA
122049863 5273 Angiosperm View MSA
121348852 5274 Embryophyte View MSA
123425843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.33985 0.0 25.1717   Low
cufflinks 21.1121 0.0 56.767 High  
cufflinks 4.18449 0.0 12.0262   Low
cufflinks 55.9202 0.0 165.122 High  
cufflinks 60.661 0.0 180.733 High High
cufflinks 40.9397 0.0 115.989 High  
cufflinks 17.4786 0.0 46.7065    
cufflinks 45.7898 0.0 131.686 High  
cufflinks 30.7887 0.0 84.7685 High  
cufflinks 38.247     High High
cufflinks 2.08       Low
cufflinks 6.469        
cufflinks 40.494     High High
cufflinks 57.9     High High
cufflinks 1.764       Low
cufflinks 13.267     High  
cufflinks 8.95     High  
cufflinks 13.161     High  
cufflinks 16.877     High  
cufflinks 8.216     High  
cufflinks 3.794        
cufflinks 9.321     High  
cufflinks 17.017     High  
cufflinks 2.175       Low
cufflinks 7.517     High  
cufflinks 9.044     High  

0 Strain