Gene : Glyma.17G224000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31585:SF3 - FOLATE-BIOPTERIN TRANSPORTER 6-RELATED Genomic Order:  2240
Name:  ? Glyma.17G224000 Secondary Identifier:  ? PAC:30478597
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G224000 0.5kb upstream 0.5kb upstream 7266   true Chr17: 37696479-37703744 Glycine max
Glyma.17G224000 0.5kb upstream 0.5kb upstream 500   false Chr17: 37696479-37696978 Glycine max
Glyma.17G224000 0.5kb downstream 0.5kb downstream 7266   true Chr17: 37696979-37704244 Glycine max
Glyma.17G224000 0.5kb downstream 0.5kb downstream 500   false Chr17: 37703745-37704244 Glycine max
Glyma.17G224000 1.0kb upstream 1.0kb upstream 7766   true Chr17: 37695979-37703744 Glycine max
Glyma.17G224000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 37695979-37696978 Glycine max
Glyma.17G224000 1.0kb downstream 1.0kb downstream 7766   true Chr17: 37696979-37704744 Glycine max
Glyma.17G224000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 37703745-37704744 Glycine max
Glyma.17G224000 2.0kb upstream 2.0kb upstream 8766   true Chr17: 37694979-37703744 Glycine max
Glyma.17G224000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 37694979-37696978 Glycine max
Glyma.17G224000 2.0kb downstream 2.0kb downstream 8766   true Chr17: 37696979-37705744 Glycine max
Glyma.17G224000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 37703745-37705744 Glycine max
Glyma.17G224000 5.0kb upstream 5.0kb upstream 11766   true Chr17: 37691979-37703744 Glycine max
Glyma.17G224000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37691979-37696978 Glycine max
Glyma.17G224000 5.0kb downstream 5.0kb downstream 11766   true Chr17: 37696979-37708744 Glycine max
Glyma.17G224000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 37703745-37708744 Glycine max
Glyma.17G224000 10.0kb upstream 10.0kb upstream 16766   true Chr17: 37686979-37703744 Glycine max
Glyma.17G224000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37686979-37696978 Glycine max
Glyma.17G224000 10.0kb downstream 10.0kb downstream 16766   true Chr17: 37696979-37713744 Glycine max
Glyma.17G224000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 37703745-37713744 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026224 5273 Angiosperm View MSA
122307196 5265 Fabidae View MSA
124062268 5270 Rosid View MSA
123737132 5271 Pentapetalae View MSA
122785737 5272 Eudicot View MSA
123429201 5275 Viridiplantae View MSA
121350834 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.69453 0.0 2.53787    
cufflinks 0.328795 0.0 1.24728    
cufflinks 0.42649 0.0 1.60028    
cufflinks 0.361223 0.0 1.36439    
cufflinks 2.33341 0.0 7.60459   High
cufflinks 3.42403 0.0 10.5942   High
cufflinks 0.119223 0.0 0.470787 Low Low
cufflinks 0.343408 0.0 1.29917    
cufflinks 1.34889 0.0 4.69555    
cufflinks 0.076     Low Low
cufflinks 0.479        
cufflinks 0.096     Low Low
cufflinks 0.871       High
cufflinks 0.573        
cufflinks 0.179        
cufflinks 0.162        
cufflinks 1.411       High
cufflinks 0.117        
cufflinks 0.133        
cufflinks 0.125        
cufflinks 0.209        
cufflinks 0.21        
cufflinks 0.183        
cufflinks 0.564        
cufflinks 0.123        
cufflinks 0.675       High

0 Strain