Gene : Glyma.17G214400 G. max Wm82.a2.v1
Defline:  (1 of 79) 3.1.4.46 - Glycerophosphodiester phosphodiesterase / Glycerophosphoryl diester phosphodiesterase Genomic Order:  2144
Name:  ? Glyma.17G214400 Secondary Identifier:  ? PAC:30479335
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G214400 0.5kb upstream 0.5kb upstream 4786   true Chr17: 35893787-35898572 Glycine max
Glyma.17G214400 0.5kb upstream 0.5kb upstream 500   false Chr17: 35898073-35898572 Glycine max
Glyma.17G214400 0.5kb downstream 0.5kb downstream 4786   true Chr17: 35893287-35898072 Glycine max
Glyma.17G214400 0.5kb downstream 0.5kb downstream 500   false Chr17: 35893287-35893786 Glycine max
Glyma.17G214400 1.0kb upstream 1.0kb upstream 5286   true Chr17: 35893787-35899072 Glycine max
Glyma.17G214400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 35898073-35899072 Glycine max
Glyma.17G214400 1.0kb downstream 1.0kb downstream 5286   true Chr17: 35892787-35898072 Glycine max
Glyma.17G214400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 35892787-35893786 Glycine max
Glyma.17G214400 2.0kb upstream 2.0kb upstream 6286   true Chr17: 35893787-35900072 Glycine max
Glyma.17G214400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 35898073-35900072 Glycine max
Glyma.17G214400 2.0kb downstream 2.0kb downstream 6286   true Chr17: 35891787-35898072 Glycine max
Glyma.17G214400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 35891787-35893786 Glycine max
Glyma.17G214400 5.0kb upstream 5.0kb upstream 9286   true Chr17: 35893787-35903072 Glycine max
Glyma.17G214400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 35898073-35903072 Glycine max
Glyma.17G214400 5.0kb downstream 5.0kb downstream 9286   true Chr17: 35888787-35898072 Glycine max
Glyma.17G214400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 35888787-35893786 Glycine max
Glyma.17G214400 10.0kb upstream 10.0kb upstream 14286   true Chr17: 35893787-35908072 Glycine max
Glyma.17G214400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 35898073-35908072 Glycine max
Glyma.17G214400 10.0kb downstream 10.0kb downstream 14286   true Chr17: 35883787-35898072 Glycine max
Glyma.17G214400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 35883787-35893786 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5934 0.0 45.5825   High
cufflinks 0.292727 0.0 1.94758    
cufflinks 14.447 0.0 61.7165   High
cufflinks 0.610776 0.0 4.71951    
cufflinks 0.244985 0.0 2.33366    
cufflinks 0.423205 0.0 2.06608    
cufflinks 0.0352433 0.0 0.153551 Low Low
cufflinks 2.90599 0.0 12.3553    
cufflinks 0.313633 0.0 2.20027    
cufflinks 0.645       High
cufflinks 0.124        
cufflinks 1.576       High
cufflinks 0.069     Low  
cufflinks 0.005     Low Low
cufflinks 0.028     Low  
cufflinks 0.099     Low  
cufflinks 1.11       High
cufflinks 0.26        
cufflinks 0.048     Low  
cufflinks 0.021     Low Low
cufflinks 0.076        
cufflinks 0.111        
cufflinks 0.219        
cufflinks 0.028     Low  
cufflinks 0.032     Low  
cufflinks 0.153        

0 Strain