Gene : Glyma.17G219400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12483//PTHR12483:SF39 - SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS Genomic Order:  2194
Name:  ? Glyma.17G219400 Secondary Identifier:  ? PAC:30479173
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G219400 0.5kb upstream 0.5kb upstream 947   true Chr17: 37096040-37096986 Glycine max
Glyma.17G219400 0.5kb upstream 0.5kb upstream 500   false Chr17: 37096487-37096986 Glycine max
Glyma.17G219400 0.5kb downstream 0.5kb downstream 947   true Chr17: 37095540-37096486 Glycine max
Glyma.17G219400 0.5kb downstream 0.5kb downstream 500   false Chr17: 37095540-37096039 Glycine max
Glyma.17G219400 1.0kb upstream 1.0kb upstream 1447   true Chr17: 37096040-37097486 Glycine max
Glyma.17G219400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 37096487-37097486 Glycine max
Glyma.17G219400 1.0kb downstream 1.0kb downstream 1447   true Chr17: 37095040-37096486 Glycine max
Glyma.17G219400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 37095040-37096039 Glycine max
Glyma.17G219400 2.0kb upstream 2.0kb upstream 2447   true Chr17: 37096040-37098486 Glycine max
Glyma.17G219400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 37096487-37098486 Glycine max
Glyma.17G219400 2.0kb downstream 2.0kb downstream 2447   true Chr17: 37094040-37096486 Glycine max
Glyma.17G219400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 37094040-37096039 Glycine max
Glyma.17G219400 5.0kb upstream 5.0kb upstream 5447   true Chr17: 37096040-37101486 Glycine max
Glyma.17G219400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37096487-37101486 Glycine max
Glyma.17G219400 5.0kb downstream 5.0kb downstream 5447   true Chr17: 37091040-37096486 Glycine max
Glyma.17G219400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 37091040-37096039 Glycine max
Glyma.17G219400 10.0kb upstream 10.0kb upstream 10447   true Chr17: 37096040-37106486 Glycine max
Glyma.17G219400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37096487-37106486 Glycine max
Glyma.17G219400 10.0kb downstream 10.0kb downstream 10447   true Chr17: 37086040-37096486 Glycine max
Glyma.17G219400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 37086040-37096039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309978 5265 Fabidae View MSA
124062976 5270 Rosid View MSA
123743336 5271 Pentapetalae View MSA
122785642 5272 Eudicot View MSA
122044839 5273 Angiosperm View MSA
121351716 5274 Embryophyte View MSA
123428463 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.58916 0.0 9.60203   Low
cufflinks 5.64232 0.0 19.9491    
cufflinks 7.48199 0.0 25.9913   High
cufflinks 3.79247 0.0 13.7802    
cufflinks 4.69784 0.0 16.6666    
cufflinks 7.76932 0.0 26.5854   High
cufflinks 4.90131 0.0 17.4056    
cufflinks 3.23086 0.0 11.8389    
cufflinks 3.79089 0.0 13.7293    
cufflinks 6.549        
cufflinks 6.58     High  
cufflinks 6.719        
cufflinks 1.881       Low
cufflinks 2.309       Low
cufflinks 7.912     High  
cufflinks 7.294     High  
cufflinks 4.08        
cufflinks 7.347     High  
cufflinks 6.761        
cufflinks 8.905     High High
cufflinks 3.539        
cufflinks 5.825        
cufflinks 3.869        
cufflinks 6.449     High  
cufflinks 6.972     High  
cufflinks 6.51     High  

0 Strain