Gene : Glyma.17G220200 G. max Wm82.a2.v1
Defline:  (1 of 3) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  2202
Name:  ? Glyma.17G220200 Secondary Identifier:  ? PAC:30480764
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G220200 0.5kb upstream 0.5kb upstream 7160   true Chr17: 37235920-37243079 Glycine max
Glyma.17G220200 0.5kb upstream 0.5kb upstream 500   false Chr17: 37242580-37243079 Glycine max
Glyma.17G220200 0.5kb downstream 0.5kb downstream 7160   true Chr17: 37235420-37242579 Glycine max
Glyma.17G220200 0.5kb downstream 0.5kb downstream 500   false Chr17: 37235420-37235919 Glycine max
Glyma.17G220200 1.0kb upstream 1.0kb upstream 7660   true Chr17: 37235920-37243579 Glycine max
Glyma.17G220200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 37242580-37243579 Glycine max
Glyma.17G220200 1.0kb downstream 1.0kb downstream 7660   true Chr17: 37234920-37242579 Glycine max
Glyma.17G220200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 37234920-37235919 Glycine max
Glyma.17G220200 2.0kb upstream 2.0kb upstream 8660   true Chr17: 37235920-37244579 Glycine max
Glyma.17G220200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 37242580-37244579 Glycine max
Glyma.17G220200 2.0kb downstream 2.0kb downstream 8660   true Chr17: 37233920-37242579 Glycine max
Glyma.17G220200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 37233920-37235919 Glycine max
Glyma.17G220200 5.0kb upstream 5.0kb upstream 11660   true Chr17: 37235920-37247579 Glycine max
Glyma.17G220200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 37242580-37247579 Glycine max
Glyma.17G220200 5.0kb downstream 5.0kb downstream 11660   true Chr17: 37230920-37242579 Glycine max
Glyma.17G220200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 37230920-37235919 Glycine max
Glyma.17G220200 10.0kb upstream 10.0kb upstream 16660   true Chr17: 37235920-37252579 Glycine max
Glyma.17G220200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 37242580-37252579 Glycine max
Glyma.17G220200 10.0kb downstream 10.0kb downstream 16660   true Chr17: 37225920-37242579 Glycine max
Glyma.17G220200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 37225920-37235919 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312476 5265 Fabidae View MSA
124067558 5270 Rosid View MSA
123739395 5271 Pentapetalae View MSA
122785869 5272 Eudicot View MSA
122042192 5273 Angiosperm View MSA
121344572 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.3194 0.0 104.975 High High
cufflinks 2.91611 0.0 18.3714    
cufflinks 2.49835 0.0 16.2072    
cufflinks 1.33251 0.0 8.8919    
cufflinks 0.860211 0.0 7.02005    
cufflinks 0.126595 0.0 0.50041 Low Low
cufflinks 1.40721 0.0 9.27324    
cufflinks 1.39337 0.0 9.47265    
cufflinks 0.415877 0.0 3.83904    
cufflinks 0.081     Low  
cufflinks 0.003     Low Low
cufflinks 0.146        
cufflinks 0.095        
cufflinks 0.099        
cufflinks 0.01     Low Low
cufflinks 0.466       High
cufflinks 0.01     Low Low
cufflinks 0.218        
cufflinks 0.239        
cufflinks 0.392        
cufflinks 0.01     Low Low
cufflinks 0.46       High
cufflinks 0.565       High
cufflinks 0.008     Low Low
cufflinks 0.489       High
cufflinks 0.013     Low  

0 Strain