Gene : Glyma.17G240900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING Genomic Order:  2409
Name:  ? Glyma.17G240900 Secondary Identifier:  ? PAC:30479185
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G240900 0.5kb upstream 0.5kb upstream 1839   true Chr17: 39633896-39635734 Glycine max
Glyma.17G240900 0.5kb upstream 0.5kb upstream 500   false Chr17: 39633896-39634395 Glycine max
Glyma.17G240900 0.5kb downstream 0.5kb downstream 1839   true Chr17: 39634396-39636234 Glycine max
Glyma.17G240900 0.5kb downstream 0.5kb downstream 500   false Chr17: 39635735-39636234 Glycine max
Glyma.17G240900 1.0kb upstream 1.0kb upstream 2339   true Chr17: 39633396-39635734 Glycine max
Glyma.17G240900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39633396-39634395 Glycine max
Glyma.17G240900 1.0kb downstream 1.0kb downstream 2339   true Chr17: 39634396-39636734 Glycine max
Glyma.17G240900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39635735-39636734 Glycine max
Glyma.17G240900 2.0kb upstream 2.0kb upstream 3339   true Chr17: 39632396-39635734 Glycine max
Glyma.17G240900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39632396-39634395 Glycine max
Glyma.17G240900 2.0kb downstream 2.0kb downstream 3339   true Chr17: 39634396-39637734 Glycine max
Glyma.17G240900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39635735-39637734 Glycine max
Glyma.17G240900 5.0kb upstream 5.0kb upstream 6339   true Chr17: 39629396-39635734 Glycine max
Glyma.17G240900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39629396-39634395 Glycine max
Glyma.17G240900 5.0kb downstream 5.0kb downstream 6339   true Chr17: 39634396-39640734 Glycine max
Glyma.17G240900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39635735-39640734 Glycine max
Glyma.17G240900 10.0kb upstream 10.0kb upstream 11339   true Chr17: 39624396-39635734 Glycine max
Glyma.17G240900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39624396-39634395 Glycine max
Glyma.17G240900 10.0kb downstream 10.0kb downstream 11339   true Chr17: 39634396-39645734 Glycine max
Glyma.17G240900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39635735-39645734 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313981 5265 Fabidae View MSA
124074559 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0031 0.0 34.2736    
cufflinks 12.1915 0.0 34.7331    
cufflinks 12.6353 0.0 35.5894    
cufflinks 6.12704 0.0 19.1171   Low
cufflinks 10.0183 0.0 29.3392    
cufflinks 16.3457 0.0 45.1974   High
cufflinks 11.7428 0.0 33.7189    
cufflinks 8.82136 0.0 26.1635    
cufflinks 12.8738 0.0 36.4765    
cufflinks 9.129     High  
cufflinks 25.679     High High
cufflinks 9.038     High  
cufflinks 8.422     High  
cufflinks 6.434       Low
cufflinks 13.798     High  
cufflinks 7.735     High  
cufflinks 26.508     High High
cufflinks 6.283       Low
cufflinks 9.375     High  
cufflinks 7.528     High  
cufflinks 16.893     High  
cufflinks 8.241     High  
cufflinks 7.536     High  
cufflinks 24.753     High High
cufflinks 7.902     High  
cufflinks 23.91     High High

0 Strain