Gene : Glyma.17G241000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12565:SF87 - TRANSCRIPTION FACTOR ALC-RELATED Genomic Order:  2410
Name:  ? Glyma.17G241000 Secondary Identifier:  ? PAC:30480976
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G241000 0.5kb upstream 0.5kb upstream 4106   true Chr17: 39641327-39645432 Glycine max
Glyma.17G241000 0.5kb upstream 0.5kb upstream 500   false Chr17: 39641327-39641826 Glycine max
Glyma.17G241000 0.5kb downstream 0.5kb downstream 4106   true Chr17: 39641827-39645932 Glycine max
Glyma.17G241000 0.5kb downstream 0.5kb downstream 500   false Chr17: 39645433-39645932 Glycine max
Glyma.17G241000 1.0kb upstream 1.0kb upstream 4606   true Chr17: 39640827-39645432 Glycine max
Glyma.17G241000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39640827-39641826 Glycine max
Glyma.17G241000 1.0kb downstream 1.0kb downstream 4606   true Chr17: 39641827-39646432 Glycine max
Glyma.17G241000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39645433-39646432 Glycine max
Glyma.17G241000 2.0kb upstream 2.0kb upstream 5606   true Chr17: 39639827-39645432 Glycine max
Glyma.17G241000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39639827-39641826 Glycine max
Glyma.17G241000 2.0kb downstream 2.0kb downstream 5606   true Chr17: 39641827-39647432 Glycine max
Glyma.17G241000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39645433-39647432 Glycine max
Glyma.17G241000 5.0kb upstream 5.0kb upstream 8606   true Chr17: 39636827-39645432 Glycine max
Glyma.17G241000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39636827-39641826 Glycine max
Glyma.17G241000 5.0kb downstream 5.0kb downstream 8606   true Chr17: 39641827-39650432 Glycine max
Glyma.17G241000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39645433-39650432 Glycine max
Glyma.17G241000 10.0kb upstream 10.0kb upstream 13606   true Chr17: 39631827-39645432 Glycine max
Glyma.17G241000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39631827-39641826 Glycine max
Glyma.17G241000 10.0kb downstream 10.0kb downstream 13606   true Chr17: 39641827-39655432 Glycine max
Glyma.17G241000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39645433-39655432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309752 5265 Fabidae View MSA
124072056 5270 Rosid View MSA
123752133 5271 Pentapetalae View MSA
122789455 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.37826 0.0 7.73609    
cufflinks 4.59262 0.0 18.3508   High
cufflinks 2.95396 0.0 13.5656    
cufflinks 0.850111 0.0 5.13028   Low
cufflinks 1.82938 0.0 12.1962    
cufflinks 1.57455 0.0 10.6146    
cufflinks 4.40453 0.0 17.9229   High
cufflinks 1.30435 0.0 7.37567    
cufflinks 1.21639 0.0 8.58499    
cufflinks 0.286        
cufflinks 0.016     Low  
cufflinks 0.23        
cufflinks 0.001     Low Low
cufflinks 0.012     Low  
cufflinks 0.105        
cufflinks 0.335        
cufflinks 0.012     Low  
cufflinks 0.435        
cufflinks 0.459       High
cufflinks 0.269        
cufflinks 0.006     Low Low
cufflinks 0.321        
cufflinks 0.324        
cufflinks 0.02     Low  
cufflinks 0.266        
cufflinks 0.016     Low  

0 Strain