Protein Family : phytochrome interacting factor 3-like 5 121348763

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  452

452 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30076.t000106 (1 of 2) K12126 - phytochrome-interacting factor 3 (PIF3) R. communis v0.1 2138   30076: 634185-636322
30115.t000061 (1 of 1) PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 3157   30115: 403858-407014
30128.t000449 (1 of 2) K12126 - phytochrome-interacting factor 3 (PIF3) R. communis v0.1 3826   30128: 2020326-2024151
30170.t000264 (1 of 1) PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA R. communis v0.1 2779   30170: 1328122-1330900
30204.t000085 (1 of 2) PTHR12565//PTHR12565:SF86 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR PIF4-RELATED R. communis v0.1 5965   30204: 552734-558698
Cucsa.395990 (1 of 2) PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN C. sativus v1.0 3130   scaffold04100: 1345002-1348131
Cucsa.078700 (1 of 1) PTHR12565:SF108 - TRANSCRIPTION FACTOR PIF1 C. sativus v1.0 3082   scaffold00793: 1029633-1032714
Cucsa.090320 (1 of 1) PTHR12565:SF178 - TRANSCRIPTION FACTOR PIF3 C. sativus v1.0 7452   scaffold00894: 1660329-1667780
Cucsa.102530 (1 of 2) PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN C. sativus v1.0 2402   scaffold00927: 1530850-1533251
Cucsa.058710 (1 of 2) PTHR12565:SF86 - TRANSCRIPTION FACTOR PIF4-RELATED C. sativus v1.0 4067   scaffold00614: 825641-829707
orange1.1g036669m.g (1 of 2) PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA C. sinensis v1.1 2213   scaffold00006: 1551111-1553323
orange1.1g014090m.g (1 of 3) PTHR12565:SF86 - TRANSCRIPTION FACTOR PIF4-RELATED C. sinensis v1.1 5897   scaffold00029: 157804-163700
orange1.1g006040m.g (1 of 2) PTHR12565:SF178 - TRANSCRIPTION FACTOR PIF3 C. sinensis v1.1 5106   scaffold00102: 281230-286335
orange1.1g007797m.g (1 of 3) PTHR12565:SF86 - TRANSCRIPTION FACTOR PIF4-RELATED C. sinensis v1.1 5235   scaffold00415: 70555-75789
orange1.1g022782m.g (1 of 2) PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA C. sinensis v1.1 2762   scaffold00002: 1954527-1957288
AT4G28800 (1 of 1) PTHR12565:SF134 - TRANSCRIPTION FACTOR BHLH056-RELATED A. thaliana TAIR10 2106   Chr4: 14221970-14224075
AT4G36930 (1 of 1) PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA A. thaliana TAIR10 SPT 2168   Chr4: 17414127-17416294
AT5G67110 (1 of 2) PTHR12565//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED A. thaliana TAIR10 ALC 1278   Chr5: 26785106-26786383
AT3G59060 (1 of 2) PTHR12565//PTHR12565:SF86 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR PIF4-RELATED A. thaliana TAIR10 PIL6 2530   Chr3: 21827978-21830507
AT1G09530 (1 of 1) K12126 - phytochrome-interacting factor 3 (PIF3) A. thaliana TAIR10 PIF3 2958   Chr1: 3076582-3079539
AT2G20180 (1 of 1) PTHR12565:SF108 - TRANSCRIPTION FACTOR PIF1 A. thaliana TAIR10 PIL5 2877   Chr2: 8704024-8706900
AT2G43010 (1 of 1) K16189 - phytochrome-interacting factor 4 (PIF4) A. thaliana TAIR10 PIF4 2624   Chr2: 17886427-17889050
AT2G46970 (1 of 2) PTHR12565:SF3 - FI24210P1 A. thaliana TAIR10 PIL1 2337   Chr2: 19295490-19297826
Thhalv10025554m.g (1 of 1) PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA E. salsugineum v1.0 1854   scaffold_1: 1201069-1202922
Thhalv10027582m.g (1 of 1) PTHR12565:SF145 - TRANSCRIPTION FACTOR BHLH119-RELATED E. salsugineum v1.0 2098   scaffold_1: 4836415-4838512
Thhalv10016715m.g (1 of 2) PTHR12565:SF86 - TRANSCRIPTION FACTOR PIF4-RELATED E. salsugineum v1.0 2798   scaffold_10: 11851690-11854487
Thhalv10001974m.g (1 of 1) PTHR12565:SF108 - TRANSCRIPTION FACTOR PIF1 E. salsugineum v1.0 2471   scaffold_12: 10501401-10503871
Thhalv10005929m.g (1 of 2) PTHR12565:SF86 - TRANSCRIPTION FACTOR PIF4-RELATED E. salsugineum v1.0 2660   scaffold_19: 1565146-1567805
Thhalv10007343m.g (1 of 1) PTHR12565:SF178 - TRANSCRIPTION FACTOR PIF3 E. salsugineum v1.0 2885   scaffold_5: 12505068-12507952
Thhalv10004889m.g (1 of 2) PTHR12565:SF87 - TRANSCRIPTION FACTOR ALC-RELATED E. salsugineum v1.0 1426   scaffold_6: 422804-424229

452 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30170.m013852 R. communis v0.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
30204.m001816 R. communis v0.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
30115.m001235 R. communis v0.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
30076.m004542 R. communis v0.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
30128.m008988 R. communis v0.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
Cucsa.090320.1 C. sativus v1.0 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
Cucsa.395990.1 C. sativus v1.0 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
Cucsa.078700.1 C. sativus v1.0 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
Cucsa.102530.1 C. sativus v1.0 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
Cucsa.058710.1 C. sativus v1.0 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
orange1.1g007797m C. sinensis v1.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
orange1.1g022782m C. sinensis v1.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
orange1.1g006040m C. sinensis v1.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
orange1.1g014090m C. sinensis v1.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
orange1.1g036669m C. sinensis v1.1 121348763 phytochrome interacting factor 3-like 5 5 5274 Embryophyte
AT3G59060.2 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
AT1G09530.1 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
AT2G46970.1 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
AT2G20180.2 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
AT2G43010.1 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
AT4G28800.1 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
AT4G36930.1 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
AT5G67110.1 A. thaliana TAIR10 121348763 phytochrome interacting factor 3-like 5 8 5274 Embryophyte
Thhalv10016715m E. salsugineum v1.0 121348763 phytochrome interacting factor 3-like 5 7 5274 Embryophyte
Thhalv10001974m E. salsugineum v1.0 121348763 phytochrome interacting factor 3-like 5 7 5274 Embryophyte
Thhalv10005929m E. salsugineum v1.0 121348763 phytochrome interacting factor 3-like 5 7 5274 Embryophyte
Thhalv10007343m E. salsugineum v1.0 121348763 phytochrome interacting factor 3-like 5 7 5274 Embryophyte
Thhalv10025554m E. salsugineum v1.0 121348763 phytochrome interacting factor 3-like 5 7 5274 Embryophyte
Thhalv10027582m E. salsugineum v1.0 121348763 phytochrome interacting factor 3-like 5 7 5274 Embryophyte
Thhalv10004889m E. salsugineum v1.0 121348763 phytochrome interacting factor 3-like 5 7 5274 Embryophyte