Gene : Glyma.17G245900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31920:SF20 - B3 DOMAIN-CONTAINING PROTEIN REM23 Genomic Order:  2459
Name:  ? Glyma.17G245900 Secondary Identifier:  ? PAC:30480548
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G245900 0.5kb upstream 0.5kb upstream 4433   true Chr17: 40134185-40138617 Glycine max
Glyma.17G245900 0.5kb upstream 0.5kb upstream 500   false Chr17: 40134185-40134684 Glycine max
Glyma.17G245900 0.5kb downstream 0.5kb downstream 4433   true Chr17: 40134685-40139117 Glycine max
Glyma.17G245900 0.5kb downstream 0.5kb downstream 500   false Chr17: 40138618-40139117 Glycine max
Glyma.17G245900 1.0kb upstream 1.0kb upstream 4933   true Chr17: 40133685-40138617 Glycine max
Glyma.17G245900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40133685-40134684 Glycine max
Glyma.17G245900 1.0kb downstream 1.0kb downstream 4933   true Chr17: 40134685-40139617 Glycine max
Glyma.17G245900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40138618-40139617 Glycine max
Glyma.17G245900 2.0kb upstream 2.0kb upstream 5933   true Chr17: 40132685-40138617 Glycine max
Glyma.17G245900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40132685-40134684 Glycine max
Glyma.17G245900 2.0kb downstream 2.0kb downstream 5933   true Chr17: 40134685-40140617 Glycine max
Glyma.17G245900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40138618-40140617 Glycine max
Glyma.17G245900 5.0kb upstream 5.0kb upstream 8933   true Chr17: 40129685-40138617 Glycine max
Glyma.17G245900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40129685-40134684 Glycine max
Glyma.17G245900 5.0kb downstream 5.0kb downstream 8933   true Chr17: 40134685-40143617 Glycine max
Glyma.17G245900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40138618-40143617 Glycine max
Glyma.17G245900 10.0kb upstream 10.0kb upstream 13933   true Chr17: 40124685-40138617 Glycine max
Glyma.17G245900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40124685-40134684 Glycine max
Glyma.17G245900 10.0kb downstream 10.0kb downstream 13933   true Chr17: 40134685-40148617 Glycine max
Glyma.17G245900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40138618-40148617 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299747 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.35965 0.0 9.963   Low
cufflinks 8.20728 0.0 29.7497    
cufflinks 8.26155 0.0 29.7661    
cufflinks 7.43874 0.0 26.9218    
cufflinks 4.46205 0.0 18.3607    
cufflinks 5.40636 0.0 17.6143    
cufflinks 9.78583 0.0 34.4626   High
cufflinks 5.1827 0.0 20.6551    
cufflinks 5.9769 0.0 22.988    
cufflinks 1.994        
cufflinks 0.6       Low
cufflinks 2.942       High
cufflinks 1.699        
cufflinks 2.145        
cufflinks 0.661       Low
cufflinks 1.876        
cufflinks 0.526       Low
cufflinks 2.794       High
cufflinks 3.124       High
cufflinks 1.962        
cufflinks 0.619       Low
cufflinks 2.035        
cufflinks 2.138        
cufflinks 0.698       Low
cufflinks 1.925        
cufflinks 0.624       Low

0 Strain