Gene : Glyma.17G236400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Genomic Order:  2364
Name:  ? Glyma.17G236400 Secondary Identifier:  ? PAC:30478582
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G236400 0.5kb upstream 0.5kb upstream 6739   true Chr17: 39148950-39155688 Glycine max
Glyma.17G236400 0.5kb upstream 0.5kb upstream 500   false Chr17: 39155189-39155688 Glycine max
Glyma.17G236400 0.5kb downstream 0.5kb downstream 6739   true Chr17: 39148450-39155188 Glycine max
Glyma.17G236400 0.5kb downstream 0.5kb downstream 500   false Chr17: 39148450-39148949 Glycine max
Glyma.17G236400 1.0kb upstream 1.0kb upstream 7239   true Chr17: 39148950-39156188 Glycine max
Glyma.17G236400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39155189-39156188 Glycine max
Glyma.17G236400 1.0kb downstream 1.0kb downstream 7239   true Chr17: 39147950-39155188 Glycine max
Glyma.17G236400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39147950-39148949 Glycine max
Glyma.17G236400 2.0kb upstream 2.0kb upstream 8239   true Chr17: 39148950-39157188 Glycine max
Glyma.17G236400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39155189-39157188 Glycine max
Glyma.17G236400 2.0kb downstream 2.0kb downstream 8239   true Chr17: 39146950-39155188 Glycine max
Glyma.17G236400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39146950-39148949 Glycine max
Glyma.17G236400 5.0kb upstream 5.0kb upstream 11239   true Chr17: 39148950-39160188 Glycine max
Glyma.17G236400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39155189-39160188 Glycine max
Glyma.17G236400 5.0kb downstream 5.0kb downstream 11239   true Chr17: 39143950-39155188 Glycine max
Glyma.17G236400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39143950-39148949 Glycine max
Glyma.17G236400 10.0kb upstream 10.0kb upstream 16239   true Chr17: 39148950-39165188 Glycine max
Glyma.17G236400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39155189-39165188 Glycine max
Glyma.17G236400 10.0kb downstream 10.0kb downstream 16239   true Chr17: 39138950-39155188 Glycine max
Glyma.17G236400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39138950-39148949 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301347 5265 Fabidae View MSA
124072070 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.77652 0.0 13.2491    
cufflinks 2.46609 0.0 7.41576    
cufflinks 1.23257 0.0 4.10495   Low
cufflinks 4.71482 0.0 13.1235    
cufflinks 2.06081 0.0 6.31081    
cufflinks 5.34619 0.0 14.6888   High
cufflinks 3.4548 0.0 9.92508    
cufflinks 2.67476 0.0 7.95869    
cufflinks 3.41362 0.0 9.81171    
cufflinks 1.835        
cufflinks 3.84       High
cufflinks 0.859       Low
cufflinks 0.921       Low
cufflinks 0.804       Low
cufflinks 1.829        
cufflinks 1.795        
cufflinks 0.843       Low
cufflinks 1.195        
cufflinks 1.282        
cufflinks 1.828        
cufflinks 2.909       High
cufflinks 1.995        
cufflinks 2.167        
cufflinks 5.882       High
cufflinks 1.497        
cufflinks 1.125        

0 Strain