Gene : Glyma.17G238600 G. max Wm82.a2.v1
Defline:  (1 of 13) PF11523 - Protein of unknown function (DUF3223) (DUF3223) Genomic Order:  2386
Name:  ? Glyma.17G238600 Secondary Identifier:  ? PAC:30481823
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G238600 0.5kb upstream 0.5kb upstream 6113   true Chr17: 39410033-39416145 Glycine max
Glyma.17G238600 0.5kb upstream 0.5kb upstream 500   false Chr17: 39415646-39416145 Glycine max
Glyma.17G238600 0.5kb downstream 0.5kb downstream 6113   true Chr17: 39409533-39415645 Glycine max
Glyma.17G238600 0.5kb downstream 0.5kb downstream 500   false Chr17: 39409533-39410032 Glycine max
Glyma.17G238600 1.0kb upstream 1.0kb upstream 6613   true Chr17: 39410033-39416645 Glycine max
Glyma.17G238600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39415646-39416645 Glycine max
Glyma.17G238600 1.0kb downstream 1.0kb downstream 6613   true Chr17: 39409033-39415645 Glycine max
Glyma.17G238600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39409033-39410032 Glycine max
Glyma.17G238600 2.0kb upstream 2.0kb upstream 7613   true Chr17: 39410033-39417645 Glycine max
Glyma.17G238600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39415646-39417645 Glycine max
Glyma.17G238600 2.0kb downstream 2.0kb downstream 7613   true Chr17: 39408033-39415645 Glycine max
Glyma.17G238600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39408033-39410032 Glycine max
Glyma.17G238600 5.0kb upstream 5.0kb upstream 10613   true Chr17: 39410033-39420645 Glycine max
Glyma.17G238600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39415646-39420645 Glycine max
Glyma.17G238600 5.0kb downstream 5.0kb downstream 10613   true Chr17: 39405033-39415645 Glycine max
Glyma.17G238600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39405033-39410032 Glycine max
Glyma.17G238600 10.0kb upstream 10.0kb upstream 15613   true Chr17: 39410033-39425645 Glycine max
Glyma.17G238600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39415646-39425645 Glycine max
Glyma.17G238600 10.0kb downstream 10.0kb downstream 15613   true Chr17: 39400033-39415645 Glycine max
Glyma.17G238600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39400033-39410032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617598 5273 Angiosperm View MSA
122253640 5265 Fabidae View MSA
123996157 5270 Rosid View MSA
123570681 5271 Pentapetalae View MSA
122605416 5272 Eudicot View MSA
120889747 5274 Embryophyte View MSA
122930471 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.64527 0.0 31.9024    
cufflinks 6.19958 0.0 20.3992    
cufflinks 4.11332 0.0 26.7612    
cufflinks 5.16359 0.0 23.8266    
cufflinks 5.78793 0.0 28.2421    
cufflinks 5.77394 0.0 19.3948    
cufflinks 12.0536 0.0 58.1439   High
cufflinks 3.41529 0.0 20.14   Low
cufflinks 6.15222 0.0 29.7781    
cufflinks 0.157       Low
cufflinks 0.183        
cufflinks 0.254        
cufflinks 0.412       High
cufflinks 0.641       High
cufflinks 0.269        
cufflinks 0.288        
cufflinks 0.146       Low
cufflinks 0.316        
cufflinks 0.331        
cufflinks 0.262        
cufflinks 0.21        
cufflinks 0.248        
cufflinks 0.294        
cufflinks 0.179       Low
cufflinks 0.292        
cufflinks 0.265        

0 Strain