Gene : Glyma.17G240400 G. max Wm82.a2.v1
Defline:  (1 of 11) PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) Genomic Order:  2404
Name:  ? Glyma.17G240400 Secondary Identifier:  ? PAC:30482131
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G240400 0.5kb upstream 0.5kb upstream 5717   true Chr17: 39597803-39603519 Glycine max
Glyma.17G240400 0.5kb upstream 0.5kb upstream 500   false Chr17: 39603020-39603519 Glycine max
Glyma.17G240400 0.5kb downstream 0.5kb downstream 5717   true Chr17: 39597303-39603019 Glycine max
Glyma.17G240400 0.5kb downstream 0.5kb downstream 500   false Chr17: 39597303-39597802 Glycine max
Glyma.17G240400 1.0kb upstream 1.0kb upstream 6217   true Chr17: 39597803-39604019 Glycine max
Glyma.17G240400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 39603020-39604019 Glycine max
Glyma.17G240400 1.0kb downstream 1.0kb downstream 6217   true Chr17: 39596803-39603019 Glycine max
Glyma.17G240400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 39596803-39597802 Glycine max
Glyma.17G240400 2.0kb upstream 2.0kb upstream 7217   true Chr17: 39597803-39605019 Glycine max
Glyma.17G240400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 39603020-39605019 Glycine max
Glyma.17G240400 2.0kb downstream 2.0kb downstream 7217   true Chr17: 39595803-39603019 Glycine max
Glyma.17G240400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 39595803-39597802 Glycine max
Glyma.17G240400 5.0kb upstream 5.0kb upstream 10217   true Chr17: 39597803-39608019 Glycine max
Glyma.17G240400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 39603020-39608019 Glycine max
Glyma.17G240400 5.0kb downstream 5.0kb downstream 10217   true Chr17: 39592803-39603019 Glycine max
Glyma.17G240400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 39592803-39597802 Glycine max
Glyma.17G240400 10.0kb upstream 10.0kb upstream 15217   true Chr17: 39597803-39613019 Glycine max
Glyma.17G240400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 39603020-39613019 Glycine max
Glyma.17G240400 10.0kb downstream 10.0kb downstream 15217   true Chr17: 39587803-39603019 Glycine max
Glyma.17G240400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 39587803-39597802 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306404 5265 Fabidae View MSA
124070544 5270 Rosid View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 122.513 0.0 439.414 High  
cufflinks 119.783 0.0 425.227 High  
cufflinks 89.3775 0.0 296.488 High  
cufflinks 105.033 0.0 362.677 High  
cufflinks 160.21 0.0 621.482 High High
cufflinks 60.5855 0.0 187.167 High Low
cufflinks 144.304 0.0 540.942 High  
cufflinks 121.346 0.0 433.589 High  
cufflinks 101.586 0.0 347.552 High  
cufflinks 50.695     High  
cufflinks 16.263     High Low
cufflinks 45.541     High  
cufflinks 82.702     High High
cufflinks 113.95     High High
cufflinks 17.419     High Low
cufflinks 40.725     High  
cufflinks 44.907     High  
cufflinks 55.21     High  
cufflinks 75.99     High High
cufflinks 34.38     High  
cufflinks 21.046     High Low
cufflinks 38.904     High  
cufflinks 61.835     High  
cufflinks 22.092     High Low
cufflinks 38.363     High  
cufflinks 25.698     High  

0 Strain