Gene : Glyma.18G022500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13768:SF8 - SOLUBLE NSF ATTACHMENT PROTEIN Genomic Order:  225
Name:  ? Glyma.18G022500 Secondary Identifier:  ? PAC:30554449
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G022500 0.5kb upstream 0.5kb upstream 5204 true Chr18: 1640508-1645711 Glycine max
Glyma.18G022500 0.5kb upstream 0.5kb upstream 500 false Chr18: 1640508-1641007 Glycine max
Glyma.18G022500 0.5kb downstream 0.5kb downstream 5204 true Chr18: 1641008-1646211 Glycine max
Glyma.18G022500 0.5kb downstream 0.5kb downstream 500 false Chr18: 1645712-1646211 Glycine max
Glyma.18G022500 1.0kb upstream 1.0kb upstream 5704 true Chr18: 1640008-1645711 Glycine max
Glyma.18G022500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1640008-1641007 Glycine max
Glyma.18G022500 1.0kb downstream 1.0kb downstream 5704 true Chr18: 1641008-1646711 Glycine max
Glyma.18G022500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1645712-1646711 Glycine max
Glyma.18G022500 2.0kb upstream 2.0kb upstream 6704 true Chr18: 1639008-1645711 Glycine max
Glyma.18G022500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1639008-1641007 Glycine max
Glyma.18G022500 2.0kb downstream 2.0kb downstream 6704 true Chr18: 1641008-1647711 Glycine max
Glyma.18G022500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1645712-1647711 Glycine max
Glyma.18G022500 5.0kb upstream 5.0kb upstream 9704 true Chr18: 1636008-1645711 Glycine max
Glyma.18G022500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1636008-1641007 Glycine max
Glyma.18G022500 5.0kb downstream 5.0kb downstream 9704 true Chr18: 1641008-1650711 Glycine max
Glyma.18G022500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1645712-1650711 Glycine max
Glyma.18G022500 10.0kb upstream 10.0kb upstream 14704 true Chr18: 1631008-1645711 Glycine max
Glyma.18G022500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1631008-1641007 Glycine max
Glyma.18G022500 10.0kb downstream 10.0kb downstream 14704 true Chr18: 1641008-1655711 Glycine max
Glyma.18G022500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1645712-1655711 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310708 5265 Fabidae View MSA
124070915 5270 Rosid View MSA
123741253 5271 Pentapetalae View MSA
122788152 5272 Eudicot View MSA
122044655 5273 Angiosperm View MSA
121343976 5274 Embryophyte View MSA
123426202 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.2503 0.0 141.68 High  
cufflinks 48.9989 0.0 135.077 High  
cufflinks 89.3871 0.0 265.114 High High
cufflinks 57.7647 0.0 161.868 High  
cufflinks 54.8856 0.0 152.868 High  
cufflinks 118.744 0.0 367.985 High High
cufflinks 48.617 0.0 133.698 High  
cufflinks 70.1703 0.0 201.319 High  
cufflinks 60.8968 0.0 171.593 High  
cufflinks 17.928     High  
cufflinks 13.794     High  
cufflinks 19.108     High High
cufflinks 20.28     High High
cufflinks 19.328     High High
cufflinks 7.011     High Low
cufflinks 12.961     High  
cufflinks 10.744     High Low
cufflinks 15.753     High  
cufflinks 12.545     High  
cufflinks 13.742     High  
cufflinks 13.643     High  
cufflinks 13.499     High  
cufflinks 11.797     High  
cufflinks 17.133     High  
cufflinks 13.45     High  
cufflinks 16.292     High  

0 Strain