Gene : Glyma.18G027200 G. max Wm82.a2.v1
Defline:  (1 of 20) 3.1.4.11 - Phosphoinositide phospholipase C / Triphosphoinositide phosphodiesterase Genomic Order:  272
Name:  ? Glyma.18G027200 Secondary Identifier:  ? PAC:30555747
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6367 Glycine max pathologic  
Gmax PWY-7039 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G027200 0.5kb upstream 0.5kb upstream 6114 true Chr18: 2042578-2048691 Glycine max
Glyma.18G027200 0.5kb upstream 0.5kb upstream 500 false Chr18: 2048192-2048691 Glycine max
Glyma.18G027200 0.5kb downstream 0.5kb downstream 6114 true Chr18: 2042078-2048191 Glycine max
Glyma.18G027200 0.5kb downstream 0.5kb downstream 500 false Chr18: 2042078-2042577 Glycine max
Glyma.18G027200 1.0kb upstream 1.0kb upstream 6614 true Chr18: 2042578-2049191 Glycine max
Glyma.18G027200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2048192-2049191 Glycine max
Glyma.18G027200 1.0kb downstream 1.0kb downstream 6614 true Chr18: 2041578-2048191 Glycine max
Glyma.18G027200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2041578-2042577 Glycine max
Glyma.18G027200 2.0kb upstream 2.0kb upstream 7614 true Chr18: 2042578-2050191 Glycine max
Glyma.18G027200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2048192-2050191 Glycine max
Glyma.18G027200 2.0kb downstream 2.0kb downstream 7614 true Chr18: 2040578-2048191 Glycine max
Glyma.18G027200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2040578-2042577 Glycine max
Glyma.18G027200 5.0kb upstream 5.0kb upstream 10614 true Chr18: 2042578-2053191 Glycine max
Glyma.18G027200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2048192-2053191 Glycine max
Glyma.18G027200 5.0kb downstream 5.0kb downstream 10614 true Chr18: 2037578-2048191 Glycine max
Glyma.18G027200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2037578-2042577 Glycine max
Glyma.18G027200 10.0kb upstream 10.0kb upstream 15614 true Chr18: 2042578-2058191 Glycine max
Glyma.18G027200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2048192-2058191 Glycine max
Glyma.18G027200 10.0kb downstream 10.0kb downstream 15614 true Chr18: 2032578-2048191 Glycine max
Glyma.18G027200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2032578-2042577 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308312 5265 Fabidae View MSA
124071120 5270 Rosid View MSA
123747360 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.999 0.0 58.0127    
cufflinks 22.4666 0.0 78.0213 High High
cufflinks 16.6758 0.0 56.9226    
cufflinks 21.0131 0.0 72.5608 High  
cufflinks 7.19695 0.0 26.1797   Low
cufflinks 11.9546 0.0 41.0128    
cufflinks 9.92724 0.0 34.6268    
cufflinks 15.9143 0.0 54.2603    
cufflinks 5.29481 0.0 17.6701   Low
cufflinks 3.163       High
cufflinks 0.609       Low
cufflinks 2.648        
cufflinks 1.644        
cufflinks 1.124        
cufflinks 0.364       Low
cufflinks 2.081        
cufflinks 1.078        
cufflinks 2.752        
cufflinks 3.993       High
cufflinks 2.291        
cufflinks 0.776       Low
cufflinks 2.768        
cufflinks 2.223        
cufflinks 1.043        
cufflinks 2.29        
cufflinks 1.989        

0 Strain