Gene : Glyma.18G014800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18934:SF140 - HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  148
Name:  ? Glyma.18G014800 Secondary Identifier:  ? PAC:30556483
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G014800 0.5kb upstream 0.5kb upstream 7224 true Chr18: 1022745-1029968 Glycine max
Glyma.18G014800 0.5kb upstream 0.5kb upstream 500 false Chr18: 1029469-1029968 Glycine max
Glyma.18G014800 0.5kb downstream 0.5kb downstream 7224 true Chr18: 1022245-1029468 Glycine max
Glyma.18G014800 0.5kb downstream 0.5kb downstream 500 false Chr18: 1022245-1022744 Glycine max
Glyma.18G014800 1.0kb upstream 1.0kb upstream 7724 true Chr18: 1022745-1030468 Glycine max
Glyma.18G014800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1029469-1030468 Glycine max
Glyma.18G014800 1.0kb downstream 1.0kb downstream 7724 true Chr18: 1021745-1029468 Glycine max
Glyma.18G014800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1021745-1022744 Glycine max
Glyma.18G014800 2.0kb upstream 2.0kb upstream 8724 true Chr18: 1022745-1031468 Glycine max
Glyma.18G014800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1029469-1031468 Glycine max
Glyma.18G014800 2.0kb downstream 2.0kb downstream 8724 true Chr18: 1020745-1029468 Glycine max
Glyma.18G014800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1020745-1022744 Glycine max
Glyma.18G014800 5.0kb upstream 5.0kb upstream 11724 true Chr18: 1022745-1034468 Glycine max
Glyma.18G014800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1029469-1034468 Glycine max
Glyma.18G014800 5.0kb downstream 5.0kb downstream 11724 true Chr18: 1017745-1029468 Glycine max
Glyma.18G014800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1017745-1022744 Glycine max
Glyma.18G014800 10.0kb upstream 10.0kb upstream 16724 true Chr18: 1022745-1039468 Glycine max
Glyma.18G014800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1029469-1039468 Glycine max
Glyma.18G014800 10.0kb downstream 10.0kb downstream 16724 true Chr18: 1012745-1029468 Glycine max
Glyma.18G014800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1012745-1022744 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303749 5265 Fabidae View MSA
124065250 5270 Rosid View MSA
123737649 5271 Pentapetalae View MSA
122792677 5272 Eudicot View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.81982 0.0 15.5428   High
cufflinks 2.89856 0.0 7.85827    
cufflinks 3.92923 0.0 10.512    
cufflinks 3.44051 0.0 9.24777    
cufflinks 2.34716 0.0 6.45034    
cufflinks 1.13742 0.0 3.38151   Low
cufflinks 3.17566 0.0 8.56729    
cufflinks 4.21026 0.0 11.2516    
cufflinks 2.85737 0.0 7.748    
cufflinks 2.392        
cufflinks 1.437       Low
cufflinks 4.182       High
cufflinks 1.807        
cufflinks 1.477       Low
cufflinks 3.268        
cufflinks 3.969        
cufflinks 1.452       Low
cufflinks 3.761        
cufflinks 4.948       High
cufflinks 4.074        
cufflinks 1.814        
cufflinks 4.168        
cufflinks 3.634        
cufflinks 1.922        
cufflinks 3.679        
cufflinks 1.622       Low

0 Strain