Gene : Glyma.18G015500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12736:SF14 - LANC-LIKE PROTEIN GCL1 Genomic Order:  155
Name:  ? Glyma.18G015500 Secondary Identifier:  ? PAC:30555199
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G015500 0.5kb upstream 0.5kb upstream 5082 true Chr18: 1103728-1108809 Glycine max
Glyma.18G015500 0.5kb upstream 0.5kb upstream 500 false Chr18: 1103728-1104227 Glycine max
Glyma.18G015500 0.5kb downstream 0.5kb downstream 5082 true Chr18: 1104228-1109309 Glycine max
Glyma.18G015500 0.5kb downstream 0.5kb downstream 500 false Chr18: 1108810-1109309 Glycine max
Glyma.18G015500 1.0kb upstream 1.0kb upstream 5582 true Chr18: 1103228-1108809 Glycine max
Glyma.18G015500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1103228-1104227 Glycine max
Glyma.18G015500 1.0kb downstream 1.0kb downstream 5582 true Chr18: 1104228-1109809 Glycine max
Glyma.18G015500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1108810-1109809 Glycine max
Glyma.18G015500 2.0kb upstream 2.0kb upstream 6582 true Chr18: 1102228-1108809 Glycine max
Glyma.18G015500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1102228-1104227 Glycine max
Glyma.18G015500 2.0kb downstream 2.0kb downstream 6582 true Chr18: 1104228-1110809 Glycine max
Glyma.18G015500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1108810-1110809 Glycine max
Glyma.18G015500 5.0kb upstream 5.0kb upstream 9582 true Chr18: 1099228-1108809 Glycine max
Glyma.18G015500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1099228-1104227 Glycine max
Glyma.18G015500 5.0kb downstream 5.0kb downstream 9582 true Chr18: 1104228-1113809 Glycine max
Glyma.18G015500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1108810-1113809 Glycine max
Glyma.18G015500 10.0kb upstream 10.0kb upstream 14582 true Chr18: 1094228-1108809 Glycine max
Glyma.18G015500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1094228-1104227 Glycine max
Glyma.18G015500 10.0kb downstream 10.0kb downstream 14582 true Chr18: 1104228-1118809 Glycine max
Glyma.18G015500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1108810-1118809 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779196 5273 Angiosperm View MSA
122308648 5265 Fabidae View MSA
124064681 5270 Rosid View MSA
123736678 5271 Pentapetalae View MSA
122769873 5272 Eudicot View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0413 0.0 58.6267    
cufflinks 28.7744 0.0 111.858 High High
cufflinks 17.4639 0.0 68.2222    
cufflinks 27.7865 0.0 109.656 High High
cufflinks 11.4203 0.0 46.8988    
cufflinks 19.5514 0.0 75.9195    
cufflinks 8.7908 0.0 28.1911   Low
cufflinks 22.7514 0.0 68.1369 High  
cufflinks 9.44788 0.0 39.1022   Low
cufflinks 17.96     High  
cufflinks 28.223     High High
cufflinks 8.815     High  
cufflinks 2.559       Low
cufflinks 0.969       Low
cufflinks 10.285     High  
cufflinks 5.098        
cufflinks 50.506     High High
cufflinks 10.915     High  
cufflinks 8.74     High  
cufflinks 4.28        
cufflinks 15.457     High  
cufflinks 4.136        
cufflinks 18.374     High  
cufflinks 33.661     High High
cufflinks 4.708        
cufflinks 36.316     High High

0 Strain