Gene : Glyma.18G017100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12059 - RIBOSOMAL PROTEIN L23-RELATED Genomic Order:  171
Name:  ? Glyma.18G017100 Secondary Identifier:  ? PAC:30558696
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G017100 0.5kb upstream 0.5kb upstream 2952 true Chr18: 1219206-1222157 Glycine max
Glyma.18G017100 0.5kb upstream 0.5kb upstream 500 false Chr18: 1221658-1222157 Glycine max
Glyma.18G017100 0.5kb downstream 0.5kb downstream 2952 true Chr18: 1218706-1221657 Glycine max
Glyma.18G017100 0.5kb downstream 0.5kb downstream 500 false Chr18: 1218706-1219205 Glycine max
Glyma.18G017100 1.0kb upstream 1.0kb upstream 3452 true Chr18: 1219206-1222657 Glycine max
Glyma.18G017100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1221658-1222657 Glycine max
Glyma.18G017100 1.0kb downstream 1.0kb downstream 3452 true Chr18: 1218206-1221657 Glycine max
Glyma.18G017100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1218206-1219205 Glycine max
Glyma.18G017100 2.0kb upstream 2.0kb upstream 4452 true Chr18: 1219206-1223657 Glycine max
Glyma.18G017100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1221658-1223657 Glycine max
Glyma.18G017100 2.0kb downstream 2.0kb downstream 4452 true Chr18: 1217206-1221657 Glycine max
Glyma.18G017100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1217206-1219205 Glycine max
Glyma.18G017100 5.0kb upstream 5.0kb upstream 7452 true Chr18: 1219206-1226657 Glycine max
Glyma.18G017100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1221658-1226657 Glycine max
Glyma.18G017100 5.0kb downstream 5.0kb downstream 7452 true Chr18: 1214206-1221657 Glycine max
Glyma.18G017100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1214206-1219205 Glycine max
Glyma.18G017100 10.0kb upstream 10.0kb upstream 12452 true Chr18: 1219206-1231657 Glycine max
Glyma.18G017100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1221658-1231657 Glycine max
Glyma.18G017100 10.0kb downstream 10.0kb downstream 12452 true Chr18: 1209206-1221657 Glycine max
Glyma.18G017100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1209206-1219205 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299568 5265 Fabidae View MSA
124068912 5270 Rosid View MSA
123740865 5271 Pentapetalae View MSA
122789044 5272 Eudicot View MSA
122044444 5273 Angiosperm View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2999 0.0 36.5444   Low
cufflinks 23.7093 0.0 70.2038 High  
cufflinks 9.21142 0.0 30.1978   Low
cufflinks 15.7484 0.0 47.4383    
cufflinks 34.5283 0.0 104.662 High High
cufflinks 19.3219 0.0 60.0755    
cufflinks 46.4451 0.0 144.295 High High
cufflinks 14.1941 0.0 42.6819    
cufflinks 21.3968 0.0 63.5438 High  
cufflinks 6.026        
cufflinks 4.776        
cufflinks 6.239        
cufflinks 15.091     High High
cufflinks 21.347     High High
cufflinks 5.529     High  
cufflinks 4.819        
cufflinks 4.604        
cufflinks 8.168     High  
cufflinks 10.092     High  
cufflinks 3.707       Low
cufflinks 6.85     High  
cufflinks 3.896        
cufflinks 6.827        
cufflinks 3.176       Low
cufflinks 4.227        
cufflinks 5.317        

0 Strain