Gene : Glyma.18G018300 G. max Wm82.a2.v1
Defline:  (1 of 31) PF04783 - Protein of unknown function (DUF630) (DUF630) Genomic Order:  183
Name:  ? Glyma.18G018300 Secondary Identifier:  ? PAC:30558167
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G018300 0.5kb upstream 0.5kb upstream 4567 true Chr18: 1337392-1341958 Glycine max
Glyma.18G018300 0.5kb upstream 0.5kb upstream 500 false Chr18: 1341459-1341958 Glycine max
Glyma.18G018300 0.5kb downstream 0.5kb downstream 4567 true Chr18: 1336892-1341458 Glycine max
Glyma.18G018300 0.5kb downstream 0.5kb downstream 500 false Chr18: 1336892-1337391 Glycine max
Glyma.18G018300 1.0kb upstream 1.0kb upstream 5067 true Chr18: 1337392-1342458 Glycine max
Glyma.18G018300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1341459-1342458 Glycine max
Glyma.18G018300 1.0kb downstream 1.0kb downstream 5067 true Chr18: 1336392-1341458 Glycine max
Glyma.18G018300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1336392-1337391 Glycine max
Glyma.18G018300 2.0kb upstream 2.0kb upstream 6067 true Chr18: 1337392-1343458 Glycine max
Glyma.18G018300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1341459-1343458 Glycine max
Glyma.18G018300 2.0kb downstream 2.0kb downstream 6067 true Chr18: 1335392-1341458 Glycine max
Glyma.18G018300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1335392-1337391 Glycine max
Glyma.18G018300 5.0kb upstream 5.0kb upstream 9067 true Chr18: 1337392-1346458 Glycine max
Glyma.18G018300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1341459-1346458 Glycine max
Glyma.18G018300 5.0kb downstream 5.0kb downstream 9067 true Chr18: 1332392-1341458 Glycine max
Glyma.18G018300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1332392-1337391 Glycine max
Glyma.18G018300 10.0kb upstream 10.0kb upstream 14067 true Chr18: 1337392-1351458 Glycine max
Glyma.18G018300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1341459-1351458 Glycine max
Glyma.18G018300 10.0kb downstream 10.0kb downstream 14067 true Chr18: 1327392-1341458 Glycine max
Glyma.18G018300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1327392-1337391 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242256 5265 Fabidae Singleton cluster - no MSA
124066962 5270 Rosid View MSA
123745138 5271 Pentapetalae View MSA
122787240 5272 Eudicot View MSA
122051058 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03189 0.0 0.131084 Low Low
cufflinks 1.34007 0.0 6.3008   High
cufflinks 0.0629298 0.0 0.249265 Low Low
cufflinks 0.266353 0.0 1.30863    
cufflinks 0.30256 0.0 1.48426    
cufflinks 0.252223 0.0 1.62118 Low  
cufflinks 0.291747 0.0 1.41357    
cufflinks 2.23491 0.0 8.82607   High
cufflinks 0.786036 0.0 4.35941    
cufflinks 0.064     Low  
cufflinks 0.009     Low  
cufflinks 0.022     Low  
cufflinks 0.039     Low  
cufflinks 0.218       High
cufflinks 0.09        
cufflinks 0.114       High
cufflinks 0.053     Low  
cufflinks 0.018     Low  
cufflinks 0.08     Low  
cufflinks 0.002     Low Low
cufflinks 0.035     Low  
cufflinks 0.031     Low  
cufflinks 0.019     Low  
cufflinks 0.002     Low Low
cufflinks 0.024     Low  
cufflinks 0.07        

0 Strain