Gene : Glyma.18G006700 G. max Wm82.a2.v1
Defline:  (1 of 9) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  67
Name:  ? Glyma.18G006700 Secondary Identifier:  ? PAC:30554408
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G006700 0.5kb upstream 0.5kb upstream 2533 true Chr18: 493222-495754 Glycine max
Glyma.18G006700 0.5kb upstream 0.5kb upstream 500 false Chr18: 495255-495754 Glycine max
Glyma.18G006700 0.5kb downstream 0.5kb downstream 2533 true Chr18: 492722-495254 Glycine max
Glyma.18G006700 0.5kb downstream 0.5kb downstream 500 false Chr18: 492722-493221 Glycine max
Glyma.18G006700 1.0kb upstream 1.0kb upstream 3033 true Chr18: 493222-496254 Glycine max
Glyma.18G006700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 495255-496254 Glycine max
Glyma.18G006700 1.0kb downstream 1.0kb downstream 3033 true Chr18: 492222-495254 Glycine max
Glyma.18G006700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 492222-493221 Glycine max
Glyma.18G006700 2.0kb upstream 2.0kb upstream 4033 true Chr18: 493222-497254 Glycine max
Glyma.18G006700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 495255-497254 Glycine max
Glyma.18G006700 2.0kb downstream 2.0kb downstream 4033 true Chr18: 491222-495254 Glycine max
Glyma.18G006700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 491222-493221 Glycine max
Glyma.18G006700 5.0kb upstream 5.0kb upstream 7033 true Chr18: 493222-500254 Glycine max
Glyma.18G006700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 495255-500254 Glycine max
Glyma.18G006700 5.0kb downstream 5.0kb downstream 7033 true Chr18: 488222-495254 Glycine max
Glyma.18G006700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 488222-493221 Glycine max
Glyma.18G006700 10.0kb upstream 10.0kb upstream 12033 true Chr18: 493222-505254 Glycine max
Glyma.18G006700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 495255-505254 Glycine max
Glyma.18G006700 10.0kb downstream 10.0kb downstream 12033 true Chr18: 483222-495254 Glycine max
Glyma.18G006700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 483222-493221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311567 5265 Fabidae View MSA
124068365 5270 Rosid View MSA
123736547 5271 Pentapetalae View MSA
122769867 5272 Eudicot View MSA
122050006 5273 Angiosperm View MSA
121311681 5274 Embryophyte View MSA
123348946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.5121 0.0 225.281 High  
cufflinks 22.667 0.0 77.6888 High Low
cufflinks 152.592 0.0 687.283 High High
cufflinks 83.5881 0.0 349.16 High  
cufflinks 36.1532 0.0 126.519 High  
cufflinks 49.638 0.0 180.974 High  
cufflinks 17.2274 0.0 59.7589   Low
cufflinks 62.3763 0.0 241.7 High  
cufflinks 30.5733 0.0 105.259 High  
cufflinks 10.307     High  
cufflinks 22.407     High High
cufflinks 38.118     High High
cufflinks 3.522       Low
cufflinks 2.528       Low
cufflinks 26.55     High High
cufflinks 5.365        
cufflinks 10.806     High  
cufflinks 19.309     High High
cufflinks 7.148        
cufflinks 6.055        
cufflinks 9.18     High  
cufflinks 7.979     High  
cufflinks 7.437        
cufflinks 7.399     High  
cufflinks 6.802        
cufflinks 12.051     High  

0 Strain