Gene : Glyma.18G006800 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4652 - HORMA domain Genomic Order:  68
Name:  ? Glyma.18G006800 Secondary Identifier:  ? PAC:30554538
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G006800 0.5kb upstream 0.5kb upstream 6623 true Chr18: 495989-502611 Glycine max
Glyma.18G006800 0.5kb upstream 0.5kb upstream 500 false Chr18: 502112-502611 Glycine max
Glyma.18G006800 0.5kb downstream 0.5kb downstream 6623 true Chr18: 495489-502111 Glycine max
Glyma.18G006800 0.5kb downstream 0.5kb downstream 500 false Chr18: 495489-495988 Glycine max
Glyma.18G006800 1.0kb upstream 1.0kb upstream 7123 true Chr18: 495989-503111 Glycine max
Glyma.18G006800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 502112-503111 Glycine max
Glyma.18G006800 1.0kb downstream 1.0kb downstream 7123 true Chr18: 494989-502111 Glycine max
Glyma.18G006800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 494989-495988 Glycine max
Glyma.18G006800 2.0kb upstream 2.0kb upstream 8123 true Chr18: 495989-504111 Glycine max
Glyma.18G006800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 502112-504111 Glycine max
Glyma.18G006800 2.0kb downstream 2.0kb downstream 8123 true Chr18: 493989-502111 Glycine max
Glyma.18G006800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 493989-495988 Glycine max
Glyma.18G006800 5.0kb upstream 5.0kb upstream 11123 true Chr18: 495989-507111 Glycine max
Glyma.18G006800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 502112-507111 Glycine max
Glyma.18G006800 5.0kb downstream 5.0kb downstream 11123 true Chr18: 490989-502111 Glycine max
Glyma.18G006800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 490989-495988 Glycine max
Glyma.18G006800 10.0kb upstream 10.0kb upstream 16123 true Chr18: 495989-512111 Glycine max
Glyma.18G006800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 502112-512111 Glycine max
Glyma.18G006800 10.0kb downstream 10.0kb downstream 16123 true Chr18: 485989-502111 Glycine max
Glyma.18G006800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 485989-495988 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041471 5273 Angiosperm View MSA
122309830 5265 Fabidae View MSA
124067688 5270 Rosid View MSA
123740838 5271 Pentapetalae View MSA
122791726 5272 Eudicot View MSA
123429135 5275 Viridiplantae View MSA
121347816 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00793203 0.0 0.0358728 Low Low
cufflinks 0.783191 0.0 2.72475    
cufflinks 1.14948 0.0 3.82199   High
cufflinks 0.170141 0.0 0.647357 Low  
cufflinks 0.387301 0.0 1.41796    
cufflinks 0.430474 0.0 1.56582    
cufflinks 0.128112 0.0 0.494426 Low  
cufflinks 0.186186 0.0 0.705635 Low  
cufflinks 0.158966 0.0 0.607099 Low  
cufflinks 0.209        
cufflinks 0.371        
cufflinks 0.596       High
cufflinks 0.341        
cufflinks 0.488        
cufflinks 0.107       Low
cufflinks 0.398        
cufflinks 0.068     Low Low
cufflinks 0.175        
cufflinks 0.317        
cufflinks 0.444        
cufflinks 0.195        
cufflinks 0.464        
cufflinks 0.734       High
cufflinks 0.122       Low
cufflinks 0.282        
cufflinks 0.245        

0 Strain