Gene : Glyma.18G006900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12210:SF13 - CTD SMALL PHOSPHATASE-LIKE PROTEIN 2 Genomic Order:  69
Name:  ? Glyma.18G006900 Secondary Identifier:  ? PAC:30558067
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G006900 0.5kb upstream 0.5kb upstream 5176 true Chr18: 504226-509401 Glycine max
Glyma.18G006900 0.5kb upstream 0.5kb upstream 500 false Chr18: 508902-509401 Glycine max
Glyma.18G006900 0.5kb downstream 0.5kb downstream 5176 true Chr18: 503726-508901 Glycine max
Glyma.18G006900 0.5kb downstream 0.5kb downstream 500 false Chr18: 503726-504225 Glycine max
Glyma.18G006900 1.0kb upstream 1.0kb upstream 5676 true Chr18: 504226-509901 Glycine max
Glyma.18G006900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 508902-509901 Glycine max
Glyma.18G006900 1.0kb downstream 1.0kb downstream 5676 true Chr18: 503226-508901 Glycine max
Glyma.18G006900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 503226-504225 Glycine max
Glyma.18G006900 2.0kb upstream 2.0kb upstream 6676 true Chr18: 504226-510901 Glycine max
Glyma.18G006900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 508902-510901 Glycine max
Glyma.18G006900 2.0kb downstream 2.0kb downstream 6676 true Chr18: 502226-508901 Glycine max
Glyma.18G006900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 502226-504225 Glycine max
Glyma.18G006900 5.0kb upstream 5.0kb upstream 9676 true Chr18: 504226-513901 Glycine max
Glyma.18G006900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 508902-513901 Glycine max
Glyma.18G006900 5.0kb downstream 5.0kb downstream 9676 true Chr18: 499226-508901 Glycine max
Glyma.18G006900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 499226-504225 Glycine max
Glyma.18G006900 10.0kb upstream 10.0kb upstream 14676 true Chr18: 504226-518901 Glycine max
Glyma.18G006900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 508902-518901 Glycine max
Glyma.18G006900 10.0kb downstream 10.0kb downstream 14676 true Chr18: 494226-508901 Glycine max
Glyma.18G006900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 494226-504225 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313265 5265 Fabidae View MSA
124070783 5270 Rosid View MSA
123745069 5271 Pentapetalae View MSA
122794821 5272 Eudicot View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1876 0.0 27.4486    
cufflinks 7.78693 0.0 21.2853    
cufflinks 8.82151 0.0 23.8794    
cufflinks 6.11394 0.0 17.0448   Low
cufflinks 9.27606 0.0 25.1241    
cufflinks 8.46066 0.0 23.0093    
cufflinks 6.62165 0.0 18.3851    
cufflinks 6.60656 0.0 18.2935    
cufflinks 13.8941 0.0 37.0928   High
cufflinks 2.356       Low
cufflinks 2.674       Low
cufflinks 4.497        
cufflinks 5.449       High
cufflinks 6.05       High
cufflinks 2.731       Low
cufflinks 3.778        
cufflinks 3.331        
cufflinks 4.098        
cufflinks 4.173        
cufflinks 3.426        
cufflinks 3.326        
cufflinks 3.927        
cufflinks 4.854       High
cufflinks 4.091        
cufflinks 3.234        
cufflinks 3.153        

0 Strain