Gene : Glyma.17G262100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF355 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  2621
Name:  ? Glyma.17G262100 Secondary Identifier:  ? PAC:30478521
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G262100 0.5kb upstream 0.5kb upstream 2931   true Chr17: 41569657-41572587 Glycine max
Glyma.17G262100 0.5kb upstream 0.5kb upstream 500   false Chr17: 41569657-41570156 Glycine max
Glyma.17G262100 0.5kb downstream 0.5kb downstream 2931   true Chr17: 41570157-41573087 Glycine max
Glyma.17G262100 0.5kb downstream 0.5kb downstream 500   false Chr17: 41572588-41573087 Glycine max
Glyma.17G262100 1.0kb upstream 1.0kb upstream 3431   true Chr17: 41569157-41572587 Glycine max
Glyma.17G262100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41569157-41570156 Glycine max
Glyma.17G262100 1.0kb downstream 1.0kb downstream 3431   true Chr17: 41570157-41573587 Glycine max
Glyma.17G262100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41572588-41573587 Glycine max
Glyma.17G262100 2.0kb upstream 2.0kb upstream 4431   true Chr17: 41568157-41572587 Glycine max
Glyma.17G262100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41568157-41570156 Glycine max
Glyma.17G262100 2.0kb downstream 2.0kb downstream 4431   true Chr17: 41570157-41574587 Glycine max
Glyma.17G262100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41572588-41574587 Glycine max
Glyma.17G262100 5.0kb upstream 5.0kb upstream 7431   true Chr17: 41565157-41572587 Glycine max
Glyma.17G262100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41565157-41570156 Glycine max
Glyma.17G262100 5.0kb downstream 5.0kb downstream 7431   true Chr17: 41570157-41577587 Glycine max
Glyma.17G262100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41572588-41577587 Glycine max
Glyma.17G262100 10.0kb upstream 10.0kb upstream 12431   true Chr17: 41560157-41572587 Glycine max
Glyma.17G262100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41560157-41570156 Glycine max
Glyma.17G262100 10.0kb downstream 10.0kb downstream 12431   true Chr17: 41570157-41582587 Glycine max
Glyma.17G262100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41572588-41582587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307843 5265 Fabidae View MSA
124065081 5270 Rosid View MSA
123737236 5271 Pentapetalae View MSA
122787210 5272 Eudicot View MSA
122044697 5273 Angiosperm View MSA
121343909 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9947 0.0 37.3726    
cufflinks 11.9492 0.0 32.0296    
cufflinks 7.60782 0.0 20.8487   Low
cufflinks 11.4043 0.0 30.6089    
cufflinks 18.6163 0.0 49.7341   High
cufflinks 21.7492 0.0 58.3433   High
cufflinks 15.4598 0.0 41.2468    
cufflinks 11.8469 0.0 31.7472    
cufflinks 14.2986 0.0 38.1684    
cufflinks 11.538     High  
cufflinks 3.732       Low
cufflinks 8.092     High  
cufflinks 17.393     High High
cufflinks 18.063     High High
cufflinks 5.528     High Low
cufflinks 16.579     High  
cufflinks 7.555     High  
cufflinks 12.312     High  
cufflinks 13.117     High  
cufflinks 15.108     High  
cufflinks 5.076       Low
cufflinks 16.78     High High
cufflinks 14.807     High  
cufflinks 5.948       Low
cufflinks 13.021     High  
cufflinks 7.286     High  

0 Strain