Gene : Glyma.18G005100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23335:SF1 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 Genomic Order:  51
Name:  ? Glyma.18G005100 Secondary Identifier:  ? PAC:30554711
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G005100 0.5kb upstream 0.5kb upstream 9537 true Chr18: 394211-403747 Glycine max
Glyma.18G005100 0.5kb upstream 0.5kb upstream 500 false Chr18: 394211-394710 Glycine max
Glyma.18G005100 0.5kb downstream 0.5kb downstream 9537 true Chr18: 394711-404247 Glycine max
Glyma.18G005100 0.5kb downstream 0.5kb downstream 500 false Chr18: 403748-404247 Glycine max
Glyma.18G005100 1.0kb upstream 1.0kb upstream 10037 true Chr18: 393711-403747 Glycine max
Glyma.18G005100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 393711-394710 Glycine max
Glyma.18G005100 1.0kb downstream 1.0kb downstream 10037 true Chr18: 394711-404747 Glycine max
Glyma.18G005100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 403748-404747 Glycine max
Glyma.18G005100 2.0kb upstream 2.0kb upstream 11037 true Chr18: 392711-403747 Glycine max
Glyma.18G005100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 392711-394710 Glycine max
Glyma.18G005100 2.0kb downstream 2.0kb downstream 11037 true Chr18: 394711-405747 Glycine max
Glyma.18G005100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 403748-405747 Glycine max
Glyma.18G005100 5.0kb upstream 5.0kb upstream 14037 true Chr18: 389711-403747 Glycine max
Glyma.18G005100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 389711-394710 Glycine max
Glyma.18G005100 5.0kb downstream 5.0kb downstream 14037 true Chr18: 394711-408747 Glycine max
Glyma.18G005100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 403748-408747 Glycine max
Glyma.18G005100 10.0kb upstream 10.0kb upstream 19037 true Chr18: 384711-403747 Glycine max
Glyma.18G005100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 384711-394710 Glycine max
Glyma.18G005100 10.0kb downstream 10.0kb downstream 19037 true Chr18: 394711-413747 Glycine max
Glyma.18G005100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 403748-413747 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296987 5265 Fabidae View MSA
124064379 5270 Rosid View MSA
123737526 5271 Pentapetalae View MSA
122795651 5272 Eudicot View MSA
122049941 5273 Angiosperm View MSA
121311657 5274 Embryophyte View MSA
123348927 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3218 0.0 83.7466 High High
cufflinks 14.5172 0.0 50.0504    
cufflinks 22.4789 0.0 84.102 High High
cufflinks 19.1686 0.0 69.1819    
cufflinks 7.31654 0.0 24.9367   Low
cufflinks 9.01011 0.0 30.5395    
cufflinks 9.56288 0.0 32.5612    
cufflinks 17.3458 0.0 61.6377    
cufflinks 9.39122 0.0 31.9488    
cufflinks 1.714        
cufflinks 1.127       Low
cufflinks 3.804        
cufflinks 1.328        
cufflinks 0.868       Low
cufflinks 1.204       Low
cufflinks 4.045       High
cufflinks 1.562        
cufflinks 3.872        
cufflinks 3.664        
cufflinks 3.575        
cufflinks 1.782        
cufflinks 5.465       High
cufflinks 2.505        
cufflinks 1.811        
cufflinks 3.962       High
cufflinks 1.471        

0 Strain