Gene : Glyma.18G055300 G. max Wm82.a2.v1
Defline:  (1 of 190) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  553
Name:  ? Glyma.18G055300 Secondary Identifier:  ? PAC:30555492
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  
Gmax PWY-7214 Glycine max pathologic  
Gmax PWY-7445 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G055300 0.5kb upstream 0.5kb upstream 4482 true Chr18: 4805286-4809767 Glycine max
Glyma.18G055300 0.5kb upstream 0.5kb upstream 500 false Chr18: 4809268-4809767 Glycine max
Glyma.18G055300 0.5kb downstream 0.5kb downstream 4482 true Chr18: 4804786-4809267 Glycine max
Glyma.18G055300 0.5kb downstream 0.5kb downstream 500 false Chr18: 4804786-4805285 Glycine max
Glyma.18G055300 1.0kb upstream 1.0kb upstream 4982 true Chr18: 4805286-4810267 Glycine max
Glyma.18G055300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4809268-4810267 Glycine max
Glyma.18G055300 1.0kb downstream 1.0kb downstream 4982 true Chr18: 4804286-4809267 Glycine max
Glyma.18G055300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4804286-4805285 Glycine max
Glyma.18G055300 2.0kb upstream 2.0kb upstream 5982 true Chr18: 4805286-4811267 Glycine max
Glyma.18G055300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4809268-4811267 Glycine max
Glyma.18G055300 2.0kb downstream 2.0kb downstream 5982 true Chr18: 4803286-4809267 Glycine max
Glyma.18G055300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4803286-4805285 Glycine max
Glyma.18G055300 5.0kb upstream 5.0kb upstream 8982 true Chr18: 4805286-4814267 Glycine max
Glyma.18G055300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4809268-4814267 Glycine max
Glyma.18G055300 5.0kb downstream 5.0kb downstream 8982 true Chr18: 4800286-4809267 Glycine max
Glyma.18G055300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4800286-4805285 Glycine max
Glyma.18G055300 10.0kb upstream 10.0kb upstream 13982 true Chr18: 4805286-4819267 Glycine max
Glyma.18G055300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4809268-4819267 Glycine max
Glyma.18G055300 10.0kb downstream 10.0kb downstream 13982 true Chr18: 4795286-4809267 Glycine max
Glyma.18G055300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4795286-4805285 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313850 5265 Fabidae View MSA
124074247 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0642 0.0 43.2612    
cufflinks 166.428 0.0 541.851 High High
cufflinks 65.0453 0.0 183.741 High  
cufflinks 38.0162 0.0 102.535 High  
cufflinks 3.55715 0.0 11.3009   Low
cufflinks 56.3577 0.0 155.945 High  
cufflinks 33.513 0.0 89.8192 High  
cufflinks 35.4735 0.0 95.4495 High  
cufflinks 2.19602 0.0 7.40922   Low
cufflinks 44.346     High High
cufflinks 0.063       Low
cufflinks 22.296     High High
cufflinks 1.008        
cufflinks 0.053     Low Low
cufflinks 0.139        
cufflinks 13.626     High  
cufflinks 0.117        
cufflinks 11.839     High  
cufflinks 89.103     High High
cufflinks 1.862        
cufflinks 0.178        
cufflinks 4.466        
cufflinks 9.331     High  
cufflinks 0.029     Low Low
cufflinks 6.015        
cufflinks 0.252        

0 Strain