Gene : Glyma.18G057500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C 26-RELATED Genomic Order:  575
Name:  ? Glyma.18G057500 Secondary Identifier:  ? PAC:30557923
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G057500 0.5kb upstream 0.5kb upstream 4197 true Chr18: 5080060-5084256 Glycine max
Glyma.18G057500 0.5kb upstream 0.5kb upstream 500 false Chr18: 5083757-5084256 Glycine max
Glyma.18G057500 0.5kb downstream 0.5kb downstream 4197 true Chr18: 5079560-5083756 Glycine max
Glyma.18G057500 0.5kb downstream 0.5kb downstream 500 false Chr18: 5079560-5080059 Glycine max
Glyma.18G057500 1.0kb upstream 1.0kb upstream 4697 true Chr18: 5080060-5084756 Glycine max
Glyma.18G057500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5083757-5084756 Glycine max
Glyma.18G057500 1.0kb downstream 1.0kb downstream 4697 true Chr18: 5079060-5083756 Glycine max
Glyma.18G057500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5079060-5080059 Glycine max
Glyma.18G057500 2.0kb upstream 2.0kb upstream 5697 true Chr18: 5080060-5085756 Glycine max
Glyma.18G057500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5083757-5085756 Glycine max
Glyma.18G057500 2.0kb downstream 2.0kb downstream 5697 true Chr18: 5078060-5083756 Glycine max
Glyma.18G057500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5078060-5080059 Glycine max
Glyma.18G057500 5.0kb upstream 5.0kb upstream 8697 true Chr18: 5080060-5088756 Glycine max
Glyma.18G057500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5083757-5088756 Glycine max
Glyma.18G057500 5.0kb downstream 5.0kb downstream 8697 true Chr18: 5075060-5083756 Glycine max
Glyma.18G057500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5075060-5080059 Glycine max
Glyma.18G057500 10.0kb upstream 10.0kb upstream 13697 true Chr18: 5080060-5093756 Glycine max
Glyma.18G057500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5083757-5093756 Glycine max
Glyma.18G057500 10.0kb downstream 10.0kb downstream 13697 true Chr18: 5070060-5083756 Glycine max
Glyma.18G057500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5070060-5080059 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308108 5265 Fabidae View MSA
124067424 5270 Rosid View MSA
123737907 5271 Pentapetalae View MSA
122786654 5272 Eudicot View MSA
122044601 5273 Angiosperm View MSA
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9531 0.0 75.84   High
cufflinks 9.64523 0.0 36.3873    
cufflinks 2.21289 0.0 10.9638   Low
cufflinks 5.6213 0.0 33.981    
cufflinks 3.86642 0.0 25.1349    
cufflinks 2.58696 0.0 14.4686    
cufflinks 4.00518 0.0 19.8812    
cufflinks 6.04649 0.0 26.0904    
cufflinks 2.53485 0.0 12.0483    
cufflinks 0.625        
cufflinks 0.058       Low
cufflinks 0.491        
cufflinks 0.316        
cufflinks 0.292        
cufflinks 0.23        
cufflinks 1.956       High
cufflinks 0.084       Low
cufflinks 0.632        
cufflinks 1.044        
cufflinks 2.432       High
cufflinks 0.078       Low
cufflinks 2.173       High
cufflinks 1.734       High
cufflinks 0.069       Low
cufflinks 2.576       High
cufflinks 0.092       Low

0 Strain