Gene : Glyma.18G047800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  478
Name:  ? Glyma.18G047800 Secondary Identifier:  ? PAC:30557695
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G047800 0.5kb upstream 0.5kb upstream 1687 true Chr18: 4153739-4155425 Glycine max
Glyma.18G047800 0.5kb upstream 0.5kb upstream 500 false Chr18: 4154926-4155425 Glycine max
Glyma.18G047800 0.5kb downstream 0.5kb downstream 1687 true Chr18: 4153239-4154925 Glycine max
Glyma.18G047800 0.5kb downstream 0.5kb downstream 500 false Chr18: 4153239-4153738 Glycine max
Glyma.18G047800 1.0kb upstream 1.0kb upstream 2187 true Chr18: 4153739-4155925 Glycine max
Glyma.18G047800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 4154926-4155925 Glycine max
Glyma.18G047800 1.0kb downstream 1.0kb downstream 2187 true Chr18: 4152739-4154925 Glycine max
Glyma.18G047800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 4152739-4153738 Glycine max
Glyma.18G047800 2.0kb upstream 2.0kb upstream 3187 true Chr18: 4153739-4156925 Glycine max
Glyma.18G047800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 4154926-4156925 Glycine max
Glyma.18G047800 2.0kb downstream 2.0kb downstream 3187 true Chr18: 4151739-4154925 Glycine max
Glyma.18G047800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 4151739-4153738 Glycine max
Glyma.18G047800 5.0kb upstream 5.0kb upstream 6187 true Chr18: 4153739-4159925 Glycine max
Glyma.18G047800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 4154926-4159925 Glycine max
Glyma.18G047800 5.0kb downstream 5.0kb downstream 6187 true Chr18: 4148739-4154925 Glycine max
Glyma.18G047800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 4148739-4153738 Glycine max
Glyma.18G047800 10.0kb upstream 10.0kb upstream 11187 true Chr18: 4153739-4164925 Glycine max
Glyma.18G047800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 4154926-4164925 Glycine max
Glyma.18G047800 10.0kb downstream 10.0kb downstream 11187 true Chr18: 4143739-4154925 Glycine max
Glyma.18G047800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 4143739-4153738 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313282 5265 Fabidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.897096 0.0 3.29755    
cufflinks 1.30268 0.0 4.67751    
cufflinks 0.331651 0.0 1.27321    
cufflinks 0.305737 0.0 1.17985   Low
cufflinks 2.88612 0.0 9.64754    
cufflinks 29.9838 0.0 79.9968 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.537538 0.0 2.02334    
cufflinks 2.93054 0.0 9.74954    
cufflinks 1.651        
cufflinks 29.296     High High
cufflinks 0.493        
cufflinks 2.631        
cufflinks 0.067     Low Low
cufflinks 1.624        
cufflinks 0.998        
cufflinks 16.264     High  
cufflinks 1.09        
cufflinks 2.833        
cufflinks 0.641        
cufflinks 20.601     High High
cufflinks 1.069        
cufflinks 1.926        
cufflinks 71.022     High High
cufflinks 0.976        
cufflinks 42.73     High High

0 Strain