Gene : Glyma.18G039600 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4168 - Predicted RNA polymerase III subunit C17 Genomic Order:  396
Name:  ? Glyma.18G039600 Secondary Identifier:  ? PAC:30555014
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G039600 0.5kb upstream 0.5kb upstream 2694 true Chr18: 3221271-3223964 Glycine max
Glyma.18G039600 0.5kb upstream 0.5kb upstream 500 false Chr18: 3223465-3223964 Glycine max
Glyma.18G039600 0.5kb downstream 0.5kb downstream 2694 true Chr18: 3220771-3223464 Glycine max
Glyma.18G039600 0.5kb downstream 0.5kb downstream 500 false Chr18: 3220771-3221270 Glycine max
Glyma.18G039600 1.0kb upstream 1.0kb upstream 3194 true Chr18: 3221271-3224464 Glycine max
Glyma.18G039600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3223465-3224464 Glycine max
Glyma.18G039600 1.0kb downstream 1.0kb downstream 3194 true Chr18: 3220271-3223464 Glycine max
Glyma.18G039600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3220271-3221270 Glycine max
Glyma.18G039600 2.0kb upstream 2.0kb upstream 4194 true Chr18: 3221271-3225464 Glycine max
Glyma.18G039600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3223465-3225464 Glycine max
Glyma.18G039600 2.0kb downstream 2.0kb downstream 4194 true Chr18: 3219271-3223464 Glycine max
Glyma.18G039600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3219271-3221270 Glycine max
Glyma.18G039600 5.0kb upstream 5.0kb upstream 7194 true Chr18: 3221271-3228464 Glycine max
Glyma.18G039600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3223465-3228464 Glycine max
Glyma.18G039600 5.0kb downstream 5.0kb downstream 7194 true Chr18: 3216271-3223464 Glycine max
Glyma.18G039600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3216271-3221270 Glycine max
Glyma.18G039600 10.0kb upstream 10.0kb upstream 12194 true Chr18: 3221271-3233464 Glycine max
Glyma.18G039600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3223465-3233464 Glycine max
Glyma.18G039600 10.0kb downstream 10.0kb downstream 12194 true Chr18: 3211271-3223464 Glycine max
Glyma.18G039600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3211271-3221270 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305183 5265 Fabidae View MSA
124063506 5270 Rosid View MSA
123740278 5271 Pentapetalae View MSA
122796140 5272 Eudicot View MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0681855 0.0 0.30837 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain