Gene : Glyma.18G028800 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.1.1.148 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase Genomic Order:  288
Name:  ? Glyma.18G028800 Secondary Identifier:  ? PAC:30558074
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6545 Glycine max pathologic  
Gmax TRPSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G028800 0.5kb upstream 0.5kb upstream 5661 true Chr18: 2170280-2175940 Glycine max
Glyma.18G028800 0.5kb upstream 0.5kb upstream 500 false Chr18: 2175441-2175940 Glycine max
Glyma.18G028800 0.5kb downstream 0.5kb downstream 5661 true Chr18: 2169780-2175440 Glycine max
Glyma.18G028800 0.5kb downstream 0.5kb downstream 500 false Chr18: 2169780-2170279 Glycine max
Glyma.18G028800 1.0kb upstream 1.0kb upstream 6161 true Chr18: 2170280-2176440 Glycine max
Glyma.18G028800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2175441-2176440 Glycine max
Glyma.18G028800 1.0kb downstream 1.0kb downstream 6161 true Chr18: 2169280-2175440 Glycine max
Glyma.18G028800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2169280-2170279 Glycine max
Glyma.18G028800 2.0kb upstream 2.0kb upstream 7161 true Chr18: 2170280-2177440 Glycine max
Glyma.18G028800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2175441-2177440 Glycine max
Glyma.18G028800 2.0kb downstream 2.0kb downstream 7161 true Chr18: 2168280-2175440 Glycine max
Glyma.18G028800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2168280-2170279 Glycine max
Glyma.18G028800 5.0kb upstream 5.0kb upstream 10161 true Chr18: 2170280-2180440 Glycine max
Glyma.18G028800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2175441-2180440 Glycine max
Glyma.18G028800 5.0kb downstream 5.0kb downstream 10161 true Chr18: 2165280-2175440 Glycine max
Glyma.18G028800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2165280-2170279 Glycine max
Glyma.18G028800 10.0kb upstream 10.0kb upstream 15161 true Chr18: 2170280-2185440 Glycine max
Glyma.18G028800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2175441-2185440 Glycine max
Glyma.18G028800 10.0kb downstream 10.0kb downstream 15161 true Chr18: 2160280-2175440 Glycine max
Glyma.18G028800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2160280-2170279 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310045 5265 Fabidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0126232 0.0 0.0567696 Low  
cufflinks 0.0276112 0.0 0.116321 Low  
cufflinks 0.00106566 0.0 0.00785588 Low Low
cufflinks 0.0488496 0.0 0.198616 Low High
cufflinks 0.0123178 0.0 0.0555303 Low  
cufflinks 0.0018559 0.0 0.0109485 Low Low
cufflinks 0.0322373 0.0 0.134335 Low  
cufflinks 0.0243328 0.0 0.10339 Low  
cufflinks 0.0131895 0.0 0.0590448 Low  
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094     Low  
cufflinks 0.009     Low Low
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.147        
cufflinks 0.004     Low Low
cufflinks 0.328       High
cufflinks 0.076     Low  
cufflinks 0.117        
cufflinks 0.016     Low  
cufflinks 0.167        
cufflinks 0.157        
cufflinks 0.004     Low Low
cufflinks 0.137        
cufflinks 0.009     Low Low

0 Strain