Gene : Glyma.18G030800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20902 - 41-2 PROTEIN ANTIGEN-RELATED Genomic Order:  308
Name:  ? Glyma.18G030800 Secondary Identifier:  ? PAC:30556402
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G030800 0.5kb upstream 0.5kb upstream 4454 true Chr18: 2361139-2365592 Glycine max
Glyma.18G030800 0.5kb upstream 0.5kb upstream 500 false Chr18: 2365093-2365592 Glycine max
Glyma.18G030800 0.5kb downstream 0.5kb downstream 4454 true Chr18: 2360639-2365092 Glycine max
Glyma.18G030800 0.5kb downstream 0.5kb downstream 500 false Chr18: 2360639-2361138 Glycine max
Glyma.18G030800 1.0kb upstream 1.0kb upstream 4954 true Chr18: 2361139-2366092 Glycine max
Glyma.18G030800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 2365093-2366092 Glycine max
Glyma.18G030800 1.0kb downstream 1.0kb downstream 4954 true Chr18: 2360139-2365092 Glycine max
Glyma.18G030800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 2360139-2361138 Glycine max
Glyma.18G030800 2.0kb upstream 2.0kb upstream 5954 true Chr18: 2361139-2367092 Glycine max
Glyma.18G030800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 2365093-2367092 Glycine max
Glyma.18G030800 2.0kb downstream 2.0kb downstream 5954 true Chr18: 2359139-2365092 Glycine max
Glyma.18G030800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 2359139-2361138 Glycine max
Glyma.18G030800 5.0kb upstream 5.0kb upstream 8954 true Chr18: 2361139-2370092 Glycine max
Glyma.18G030800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 2365093-2370092 Glycine max
Glyma.18G030800 5.0kb downstream 5.0kb downstream 8954 true Chr18: 2356139-2365092 Glycine max
Glyma.18G030800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 2356139-2361138 Glycine max
Glyma.18G030800 10.0kb upstream 10.0kb upstream 13954 true Chr18: 2361139-2375092 Glycine max
Glyma.18G030800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 2365093-2375092 Glycine max
Glyma.18G030800 10.0kb downstream 10.0kb downstream 13954 true Chr18: 2351139-2365092 Glycine max
Glyma.18G030800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 2351139-2361138 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314696 5265 Fabidae View MSA
124065767 5270 Rosid View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0145 0.0 43.8896    
cufflinks 17.6526 0.0 48.0874    
cufflinks 12.3155 0.0 34.491   Low
cufflinks 19.5636 0.0 52.9016    
cufflinks 23.9028 0.0 64.112 High  
cufflinks 29.4547 0.0 78.642 High High
cufflinks 14.3627 0.0 39.7386    
cufflinks 27.4186 0.0 73.3023 High High
cufflinks 18.6716 0.0 50.7001    
cufflinks 6.214       High
cufflinks 1.84       Low
cufflinks 3.823        
cufflinks 8.027     High High
cufflinks 9.819     High High
cufflinks 1.531       Low
cufflinks 3.556        
cufflinks 2.926        
cufflinks 4.863        
cufflinks 4.747        
cufflinks 2.977        
cufflinks 2.817        
cufflinks 3.148        
cufflinks 4.23        
cufflinks 3.111        
cufflinks 3.2        
cufflinks 3.414        

0 Strain