Gene : Glyma.18G079000 G. max Wm82.a2.v1
Defline:  (1 of 96) PF13962 - Domain of unknown function (PGG) Genomic Order:  790
Name:  ? Glyma.18G079000 Secondary Identifier:  ? PAC:30557557
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G079000 0.5kb upstream 0.5kb upstream 5482 true Chr18: 7595306-7600787 Glycine max
Glyma.18G079000 0.5kb upstream 0.5kb upstream 500 false Chr18: 7600288-7600787 Glycine max
Glyma.18G079000 0.5kb downstream 0.5kb downstream 5482 true Chr18: 7594806-7600287 Glycine max
Glyma.18G079000 0.5kb downstream 0.5kb downstream 500 false Chr18: 7594806-7595305 Glycine max
Glyma.18G079000 1.0kb upstream 1.0kb upstream 5982 true Chr18: 7595306-7601287 Glycine max
Glyma.18G079000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7600288-7601287 Glycine max
Glyma.18G079000 1.0kb downstream 1.0kb downstream 5982 true Chr18: 7594306-7600287 Glycine max
Glyma.18G079000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7594306-7595305 Glycine max
Glyma.18G079000 2.0kb upstream 2.0kb upstream 6982 true Chr18: 7595306-7602287 Glycine max
Glyma.18G079000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7600288-7602287 Glycine max
Glyma.18G079000 2.0kb downstream 2.0kb downstream 6982 true Chr18: 7593306-7600287 Glycine max
Glyma.18G079000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7593306-7595305 Glycine max
Glyma.18G079000 5.0kb upstream 5.0kb upstream 9982 true Chr18: 7595306-7605287 Glycine max
Glyma.18G079000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7600288-7605287 Glycine max
Glyma.18G079000 5.0kb downstream 5.0kb downstream 9982 true Chr18: 7590306-7600287 Glycine max
Glyma.18G079000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7590306-7595305 Glycine max
Glyma.18G079000 10.0kb upstream 10.0kb upstream 14982 true Chr18: 7595306-7610287 Glycine max
Glyma.18G079000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7600288-7610287 Glycine max
Glyma.18G079000 10.0kb downstream 10.0kb downstream 14982 true Chr18: 7585306-7600287 Glycine max
Glyma.18G079000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7585306-7595305 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315215 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0363108 0.0 0.150574 Low  
cufflinks 0.046363 0.0 0.189359 Low  
cufflinks 0.0201734 0.0 0.0873824 Low  
cufflinks 0.0107378 0.0 0.0493313 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0787837 0.0 0.315146 Low  
cufflinks 1.05695 0.0 3.72374   High
cufflinks 0.0248474 0.0 0.105896 Low  
cufflinks 0.511       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.003     Low Low

0 Strain