Gene : Glyma.18G079400 G. max Wm82.a2.v1
Defline:  (1 of 6) PF01426//PF05641 - BAH domain (BAH) // Agenet domain (Agenet) Genomic Order:  794
Name:  ? Glyma.18G079400 Secondary Identifier:  ? PAC:30554499
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G079400 0.5kb upstream 0.5kb upstream 7389 true Chr18: 7625043-7632431 Glycine max
Glyma.18G079400 0.5kb upstream 0.5kb upstream 500 false Chr18: 7625043-7625542 Glycine max
Glyma.18G079400 0.5kb downstream 0.5kb downstream 7389 true Chr18: 7625543-7632931 Glycine max
Glyma.18G079400 0.5kb downstream 0.5kb downstream 500 false Chr18: 7632432-7632931 Glycine max
Glyma.18G079400 1.0kb upstream 1.0kb upstream 7889 true Chr18: 7624543-7632431 Glycine max
Glyma.18G079400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7624543-7625542 Glycine max
Glyma.18G079400 1.0kb downstream 1.0kb downstream 7889 true Chr18: 7625543-7633431 Glycine max
Glyma.18G079400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7632432-7633431 Glycine max
Glyma.18G079400 2.0kb upstream 2.0kb upstream 8889 true Chr18: 7623543-7632431 Glycine max
Glyma.18G079400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7623543-7625542 Glycine max
Glyma.18G079400 2.0kb downstream 2.0kb downstream 8889 true Chr18: 7625543-7634431 Glycine max
Glyma.18G079400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7632432-7634431 Glycine max
Glyma.18G079400 5.0kb upstream 5.0kb upstream 11889 true Chr18: 7620543-7632431 Glycine max
Glyma.18G079400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7620543-7625542 Glycine max
Glyma.18G079400 5.0kb downstream 5.0kb downstream 11889 true Chr18: 7625543-7637431 Glycine max
Glyma.18G079400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7632432-7637431 Glycine max
Glyma.18G079400 10.0kb upstream 10.0kb upstream 16889 true Chr18: 7615543-7632431 Glycine max
Glyma.18G079400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7615543-7625542 Glycine max
Glyma.18G079400 10.0kb downstream 10.0kb downstream 16889 true Chr18: 7625543-7642431 Glycine max
Glyma.18G079400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7632432-7642431 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302137 5265 Fabidae View MSA
124060613 5270 Rosid View MSA
123742959 5271 Pentapetalae View MSA
122786842 5272 Eudicot View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8514 0.0 63.2789   High
cufflinks 10.7052 0.0 51.1021    
cufflinks 11.524 0.0 50.2853    
cufflinks 10.6111 0.0 47.8868    
cufflinks 8.23346 0.0 35.6936   Low
cufflinks 9.66893 0.0 45.8235    
cufflinks 14.3102 0.0 58.4664   High
cufflinks 10.566 0.0 42.1145    
cufflinks 10.9043 0.0 52.2378    
cufflinks 0.99       Low
cufflinks 1.793        
cufflinks 1.269        
cufflinks 0.828       Low
cufflinks 0.686       Low
cufflinks 1.415        
cufflinks 1.81        
cufflinks 0.983       Low
cufflinks 1.339        
cufflinks 1.391        
cufflinks 2.041       High
cufflinks 1.689        
cufflinks 2.051       High
cufflinks 1.411        
cufflinks 1.826        
cufflinks 1.997       High
cufflinks 1.365        

0 Strain