Gene : Glyma.18G079900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11700:SF9 - 37S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Genomic Order:  799
Name:  ? Glyma.18G079900 Secondary Identifier:  ? PAC:30554934
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G079900 0.5kb upstream 0.5kb upstream 4791 true Chr18: 7652874-7657664 Glycine max
Glyma.18G079900 0.5kb upstream 0.5kb upstream 500 false Chr18: 7652874-7653373 Glycine max
Glyma.18G079900 0.5kb downstream 0.5kb downstream 4791 true Chr18: 7653374-7658164 Glycine max
Glyma.18G079900 0.5kb downstream 0.5kb downstream 500 false Chr18: 7657665-7658164 Glycine max
Glyma.18G079900 1.0kb upstream 1.0kb upstream 5291 true Chr18: 7652374-7657664 Glycine max
Glyma.18G079900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7652374-7653373 Glycine max
Glyma.18G079900 1.0kb downstream 1.0kb downstream 5291 true Chr18: 7653374-7658664 Glycine max
Glyma.18G079900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7657665-7658664 Glycine max
Glyma.18G079900 2.0kb upstream 2.0kb upstream 6291 true Chr18: 7651374-7657664 Glycine max
Glyma.18G079900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7651374-7653373 Glycine max
Glyma.18G079900 2.0kb downstream 2.0kb downstream 6291 true Chr18: 7653374-7659664 Glycine max
Glyma.18G079900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7657665-7659664 Glycine max
Glyma.18G079900 5.0kb upstream 5.0kb upstream 9291 true Chr18: 7648374-7657664 Glycine max
Glyma.18G079900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7648374-7653373 Glycine max
Glyma.18G079900 5.0kb downstream 5.0kb downstream 9291 true Chr18: 7653374-7662664 Glycine max
Glyma.18G079900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7657665-7662664 Glycine max
Glyma.18G079900 10.0kb upstream 10.0kb upstream 14291 true Chr18: 7643374-7657664 Glycine max
Glyma.18G079900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7643374-7653373 Glycine max
Glyma.18G079900 10.0kb downstream 10.0kb downstream 14291 true Chr18: 7653374-7667664 Glycine max
Glyma.18G079900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7657665-7667664 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026497 5273 Angiosperm View MSA
122306608 5265 Fabidae View MSA
124068584 5270 Rosid View MSA
123745585 5271 Pentapetalae View MSA
122786929 5272 Eudicot View MSA
121343916 5274 Embryophyte View MSA
123426498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0574 0.0 64.7275 High High
cufflinks 41.8341 0.0 111.766 High High
cufflinks 11.7712 0.0 33.3018    
cufflinks 12.2422 0.0 34.5691    
cufflinks 8.46111 0.0 25.0778    
cufflinks 8.64949 0.0 25.5269    
cufflinks 14.7925 0.0 41.05    
cufflinks 10.3842 0.0 29.812    
cufflinks 6.95271 0.0 21.0974   Low
cufflinks 3.853        
cufflinks 0.627        
cufflinks 3.354        
cufflinks 0.818        
cufflinks 0.978        
cufflinks 0.554        
cufflinks 22.421     High High
cufflinks 0.46       Low
cufflinks 3.58        
cufflinks 7.093        
cufflinks 22.299     High High
cufflinks 0.66        
cufflinks 19.486     High High
cufflinks 22.867     High High
cufflinks 0.61        
cufflinks 22.78     High High
cufflinks 0.346       Low

0 Strain